Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 AC105020.1-201ENST00000435356 2205 ntBASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 AC011676.5-201ENST00000624864 2660 ntBASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 AC004461.1-201ENST00000412461 403 ntBASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 PCDHB17P-201ENST00000539533 2393 ntBASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FNDC3AQ9Y2H6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 BCRP1-201ENST00000444246 691 ntBASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 AC087163.2-201ENST00000457299 853 ntBASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 AC105339.1-204ENST00000636249 355 ntBASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 RNF216P1-203ENST00000404404 2427 ntBASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FNDC3AQ9Y2H6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 NKILA-202ENST00000614771 2598 ntBASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 CXCL1P1-201ENST00000502804 216 ntBASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 AC068137.2-201ENST00000605408 478 ntBASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 AC020916.1-201ENST00000587762 1774 ntBASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
FNDC3AQ9Y2H6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms