Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 FOXO1B-201ENST00000504678 1527 ntBASIC17.5■□□□□ 0.39
CDH9Q9ULB4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 PCGF3-213ENST00000620529 1899 ntBASIC17.5■□□□□ 0.39
CDH9Q9ULB4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.5■□□□□ 0.39
CDH9Q9ULB4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 AC093724.1-201ENST00000448659 1027 ntBASIC17.49■□□□□ 0.39
CDH9Q9ULB4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 AC098859.1-201ENST00000502915 1238 ntBASIC17.49■□□□□ 0.39
CDH9Q9ULB4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 AC069262.1-201ENST00000539058 672 ntBASIC17.49■□□□□ 0.39
CDH9Q9ULB4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 SPTSSB-204ENST00000617024 1292 ntBASIC17.49■□□□□ 0.39
CDH9Q9ULB4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 Z92544.3-201ENST00000624747 417 ntBASIC17.49■□□□□ 0.39
CDH9Q9ULB4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDH9Q9ULB4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 LINC01144-201ENST00000626198 1710 ntBASIC17.48■□□□□ 0.39
CDH9Q9ULB4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 SPDYE7P-202ENST00000420373 878 ntBASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 CNN2P2-201ENST00000443536 909 ntBASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 CNN2P3-201ENST00000450201 906 ntBASIC17.48■□□□□ 0.39
CDH9Q9ULB4 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AL136317.3-201ENST00000618497 906 ntBASIC17.48■□□□□ 0.39
CDH9Q9ULB4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDH9Q9ULB4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms