Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 SIGLEC30P-201ENST00000455569 941 ntBASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AC105339.3-201ENST00000560043 636 ntBASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AC019129.2-201ENST00000609837 1235 ntBASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AC116407.3-201ENST00000623905 1129 ntBASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AC243591.1-201ENST00000452967 1364 ntBASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TIMMDC1Q9NPL8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 AC006557.2-201ENST00000592985 1240 ntBASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TIMMDC1Q9NPL8 AC132938.5-201ENST00000624980 1813 ntBASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 ZNF259P1-201ENST00000407656 1365 ntBASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.05■□□□□ 0.16
TIMMDC1Q9NPL8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms