Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CAMKMT-206ENST00000428993 526 ntTSL 36.36□□□□□ -1.392e-6■■□□□ 11.7
XRN2Q9H0D6 CAMKMT-208ENST00000477623 572 ntTSL 35.24□□□□□ -1.572e-6■■□□□ 11.7
XRN2Q9H0D6 CAMKMT-207ENST00000454433 843 ntTSL 55.03□□□□□ -1.62e-6■■□□□ 11.7
XRN2Q9H0D6 CAMKMT-205ENST00000428929 401 ntTSL 34.49□□□□□ -1.692e-6■■□□□ 11.7
XRN2Q9H0D6 CGGBP1-205ENST00000474441 717 ntTSL 23.27□□□□□ -1.892e-6■■□□□ 11.7
XRN2Q9H0D6 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.92■■□□□ 1.423e-6■■□□□ 11.7
XRN2Q9H0D6 D2HGDH-202ENST00000400769 2277 ntTSL 223.14■■□□□ 1.293e-6■■□□□ 11.7
XRN2Q9H0D6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.833e-6■■□□□ 11.7
XRN2Q9H0D6 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)17.59■□□□□ 0.413e-6■■□□□ 11.7
XRN2Q9H0D6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.583e-6■■□□□ 11.7
XRN2Q9H0D6 AKT2-208ENST00000416994 904 ntTSL 422.13■■□□□ 1.135e-6■■□□□ 11.7
XRN2Q9H0D6 AKT2-209ENST00000423127 798 ntTSL 510.99□□□□□ -0.655e-6■■□□□ 11.7
XRN2Q9H0D6 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.277e-7■■□□□ 11.7
XRN2Q9H0D6 PROC-204ENST00000419985 500 ntTSL 426.2■■□□□ 1.784e-8■■□□□ 11.7
XRN2Q9H0D6 IL18BP-203ENST00000343898 1720 ntTSL 1 (best)17.88■□□□□ 0.451e-7■■□□□ 11.7
XRN2Q9H0D6 IL18BP-209ENST00000497194 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.431e-7■■□□□ 11.7
XRN2Q9H0D6 ACAP3-208ENST00000472541 1946 ntTSL 521.25■□□□□ 0.993e-7■■□□□ 11.7
XRN2Q9H0D6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.443e-7■■□□□ 11.7
XRN2Q9H0D6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.785e-7■■□□□ 11.7
XRN2Q9H0D6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.945e-7■■□□□ 11.7
XRN2Q9H0D6 SLC16A3-213ENST00000582715 279 ntTSL 518.78■□□□□ 0.65e-7■■□□□ 11.7
XRN2Q9H0D6 SOX2-OT-241ENST00000626948 836 ntTSL 516.41■□□□□ 0.225e-40■■□□□ 11.6
XRN2Q9H0D6 SOX2-OT-256ENST00000630482 1012 ntTSL 514.77□□□□□ -0.055e-40■■□□□ 11.6
XRN2Q9H0D6 SOX2-OT-201ENST00000460739 609 ntTSL 4 BASIC14.19□□□□□ -0.145e-40■■□□□ 11.6
XRN2Q9H0D6 SOX2-OT-215ENST00000493521 1239 ntTSL 3 BASIC12.36□□□□□ -0.435e-40■■□□□ 11.6
XRN2Q9H0D6 SOX2-OT-226ENST00000597347 1342 ntTSL 511.47□□□□□ -0.575e-40■■□□□ 11.6
XRN2Q9H0D6 SOX2-OT-214ENST00000493116 560 ntTSL 45.48□□□□□ -1.535e-40■■□□□ 11.6
XRN2Q9H0D6 SOX2-OT-204ENST00000469278 561 ntTSL 43.48□□□□□ -1.855e-40■■□□□ 11.6
XRN2Q9H0D6 RNU6-4P-201ENST00000384205 107 ntBASIC3.04□□□□□ -1.925e-40■■□□□ 11.6
XRN2Q9H0D6 AL662899.3-202ENST00000617558 991 ntTSL 1 (best) BASIC13.19□□□□□ -0.31e-6■■□□□ 11.6
XRN2Q9H0D6 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.521e-6■■□□□ 11.6
XRN2Q9H0D6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.572e-6■■□□□ 11.6
XRN2Q9H0D6 PCYT2-207ENST00000571581 999 ntTSL 531.16■■■□□ 2.588e-8■■□□□ 11.6
XRN2Q9H0D6 PCYT2-213ENST00000573401 1028 ntTSL 529.13■■■□□ 2.258e-8■■□□□ 11.6
XRN2Q9H0D6 PCYT2-214ENST00000573636 913 ntTSL 528.93■■■□□ 2.228e-8■■□□□ 11.6
XRN2Q9H0D6 PCYT2-210ENST00000572473 575 ntTSL 524.88■■□□□ 1.578e-8■■□□□ 11.6
XRN2Q9H0D6 PCYT2-215ENST00000573927 778 ntTSL 319.47■□□□□ 0.718e-8■■□□□ 11.6
XRN2Q9H0D6 PCYT2-209ENST00000572157 442 ntTSL 412.6□□□□□ -0.398e-8■■□□□ 11.6
XRN2Q9H0D6 PLXNB1-218ENST00000485535 3264 ntTSL 212.05□□□□□ -0.481e-8■■□□□ 11.6
XRN2Q9H0D6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.584e-6■■□□□ 11.6
XRN2Q9H0D6 FDFT1-220ENST00000531733 712 ntTSL 225.8■■□□□ 1.727e-7■■□□□ 11.6
XRN2Q9H0D6 INTS11-242ENST00000531377 816 ntTSL 521.25■□□□□ 0.998e-10■■□□□ 11.6
XRN2Q9H0D6 FDFT1-219ENST00000531249 768 ntTSL 215.57■□□□□ 0.087e-7■■□□□ 11.6
XRN2Q9H0D6 MTSS1L-202ENST00000562883 407 ntTSL 220.59■□□□□ 0.894e-38■■□□□ 11.6
XRN2Q9H0D6 ACSS2-213ENST00000480978 844 ntTSL 225.44■■□□□ 1.662e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-210ENST00000476922 1527 ntTSL 221.96■■□□□ 1.112e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-211ENST00000477932 2450 ntTSL 519.71■□□□□ 0.752e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.18■□□□□ 0.52e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.062e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-220ENST00000491533 933 ntTSL 513.93□□□□□ -0.182e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-223ENST00000494727 1030 ntTSL 211.68□□□□□ -0.542e-10■■□□□ 11.6
XRN2Q9H0D6 ACSS2-214ENST00000481284 2851 ntTSL 210.11□□□□□ -0.792e-10■■□□□ 11.6
XRN2Q9H0D6 PFKL-210ENST00000496824 1063 ntTSL 524.08■■□□□ 1.453e-6■■□□□ 11.6
XRN2Q9H0D6 AC004687.1-201ENST00000579003 1625 ntBASIC24.67■■□□□ 1.549e-17■■□□□ 11.6
XRN2Q9H0D6 RCC1-212ENST00000486790 481 ntTSL 532.24■■■□□ 2.752e-7■■□□□ 11.6
XRN2Q9H0D6 RCC1-209ENST00000430407 1121 ntTSL 521.28■■□□□ 12e-7■■□□□ 11.6
XRN2Q9H0D6 NEK6-211ENST00000454453 732 ntTSL 331.7■■■□□ 2.675e-6■■□□□ 11.6
XRN2Q9H0D6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.115e-6■■□□□ 11.6
XRN2Q9H0D6 MSI2-210ENST00000579505 577 ntTSL 320.46■□□□□ 0.871e-6■■□□□ 11.6
XRN2Q9H0D6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.01■□□□□ 0.311e-6■■□□□ 11.6
XRN2Q9H0D6 NFYC-209ENST00000424419 1276 ntTSL 225.01■■□□□ 1.591e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-214ENST00000453631 650 ntTSL 523.98■■□□□ 1.431e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.97■■□□□ 1.111e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-224ENST00000534399 574 ntTSL 421.95■■□□□ 1.11e-7■■□□□ 11.6
XRN2Q9H0D6 DDX39A-204ENST00000586558 1127 ntTSL 221.94■■□□□ 1.11e-7■■□□□ 11.6
XRN2Q9H0D6 DDX39A-212ENST00000590260 988 ntTSL 221.48■■□□□ 1.031e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.72■□□□□ 0.591e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.261e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.191e-7■■□□□ 11.6
XRN2Q9H0D6 DDX39A-218ENST00000592632 586 ntTSL 215.14■□□□□ 0.011e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-216ENST00000467203 943 ntTSL 214.41□□□□□ -0.11e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-211ENST00000427410 1379 ntTSL 2 BASIC12.57□□□□□ -0.41e-7■■□□□ 11.6
XRN2Q9H0D6 NFYC-213ENST00000447388 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.61e-7■■□□□ 11.6
XRN2Q9H0D6 DDX39A-220ENST00000593008 538 ntTSL 311.16□□□□□ -0.621e-7■■□□□ 11.6
XRN2Q9H0D6 TRAP1-207ENST00000571804 781 ntTSL 527.2■■□□□ 1.942e-12■■□□□ 11.6
XRN2Q9H0D6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.98■■□□□ 1.272e-12■■□□□ 11.6
XRN2Q9H0D6 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.072e-12■■□□□ 11.6
XRN2Q9H0D6 SYNJ2-205ENST00000449320 680 ntTSL 49.05□□□□□ -0.963e-6■■□□□ 11.6
XRN2Q9H0D6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.57□□□□□ -1.849e-9■■□□□ 11.6
XRN2Q9H0D6 ANKRD11-205ENST00000562194 618 ntTSL 318.77■□□□□ 0.62e-6■■□□□ 11.5
XRN2Q9H0D6 SEMA4G-206ENST00000518124 596 ntTSL 321.72■■□□□ 1.078e-10■■□□□ 11.5
XRN2Q9H0D6 SEMA4G-207ENST00000518244 652 ntTSL 321.68■■□□□ 1.068e-10■■□□□ 11.5
XRN2Q9H0D6 SEMA4G-209ENST00000519649 2024 ntTSL 515.9■□□□□ 0.148e-10■■□□□ 11.5
XRN2Q9H0D6 SEMA4G-211ENST00000521006 4656 ntTSL 1 (best)13.64□□□□□ -0.238e-10■■□□□ 11.5
XRN2Q9H0D6 XPO1-211ENST00000451765 643 ntTSL 319.84■□□□□ 0.771e-6■■□□□ 11.5
XRN2Q9H0D6 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.231e-6■■□□□ 11.5
XRN2Q9H0D6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.122e-6■■□□□ 11.5
XRN2Q9H0D6 MSI2-215ENST00000582453 496 ntTSL 33.31□□□□□ -1.882e-6■■□□□ 11.5
XRN2Q9H0D6 TCF25-207ENST00000562256 1879 ntTSL 1 (best)18.24■□□□□ 0.512e-6■■□□□ 11.5
XRN2Q9H0D6 SLC29A4-206ENST00000444741 585 ntTSL 427.7■■■□□ 2.022e-7■■□□□ 11.5
XRN2Q9H0D6 PET100-207ENST00000623154 1815 nt25.97■■□□□ 1.752e-7■■□□□ 11.5
XRN2Q9H0D6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.492e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-207ENST00000459957 873 ntTSL 224.29■■□□□ 1.482e-7■■□□□ 11.5
XRN2Q9H0D6 AC008763.2-202ENST00000599243 570 ntAPPRIS ALT2 TSL 423.13■■□□□ 1.292e-7■■□□□ 11.5
XRN2Q9H0D6 SEPT9-243ENST00000592407 509 ntTSL 222.87■■□□□ 1.252e-7■■□□□ 11.5
XRN2Q9H0D6 PLCG1-206ENST00000470528 510 ntTSL 422.36■■□□□ 1.172e-7■■□□□ 11.5
XRN2Q9H0D6 TUBGCP6-202ENST00000425018 1509 ntTSL 1 (best)22.14■■□□□ 1.132e-7■■□□□ 11.5
XRN2Q9H0D6 SLC29A4-204ENST00000434816 623 ntTSL 220.9■□□□□ 0.942e-7■■□□□ 11.5
XRN2Q9H0D6 MGRN1-205ENST00000585676 629 ntTSL 420.75■□□□□ 0.912e-7■■□□□ 11.5
XRN2Q9H0D6 TTC31-208ENST00000463189 894 ntTSL 320.06■□□□□ 0.82e-7■■□□□ 11.5
Retrieved 100 of 21,068 protein–RNA pairs in 113.5 ms