RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-256ENST00000630482 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
SOX2-OT-256ENST00000630482 CCDC180Q9P1Z9 1646 aa27.61■■■□□ 2.01
SOX2-OT-256ENST00000630482 ABCC9O60706 1549 aa27.47■■□□□ 1.99
SOX2-OT-256ENST00000630482 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
SOX2-OT-256ENST00000630482 NACADO15069 1562 aa25.95■■□□□ 1.75
SOX2-OT-256ENST00000630482 UNC13AQ9UPW8 1703 aa25.9■■□□□ 1.74
SOX2-OT-256ENST00000630482 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
SOX2-OT-256ENST00000630482 DNAJC5BQ9UF47 199 aa25.67■■□□□ 1.7
SOX2-OT-256ENST00000630482 MYO15BQ96JP2 1530 aa25.53■■□□□ 1.68
SOX2-OT-256ENST00000630482 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
SOX2-OT-256ENST00000630482 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
SOX2-OT-256ENST00000630482 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
SOX2-OT-256ENST00000630482 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
SOX2-OT-256ENST00000630482 SCRIBQ14160 1630 aa25.16■■□□□ 1.62
SOX2-OT-256ENST00000630482 SHROOM4Q9ULL8 1493 aa24.96■■□□□ 1.59
SOX2-OT-256ENST00000630482 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
SOX2-OT-256ENST00000630482 EIF4G1Q04637 1599 aaKnown RBP24.81■■□□□ 1.56
SOX2-OT-256ENST00000630482 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
SOX2-OT-256ENST00000630482 SMARCA4P51532 1647 aa23.98■■□□□ 1.43
SOX2-OT-256ENST00000630482 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
SOX2-OT-256ENST00000630482 ATAD2BQ9ULI0 1458 aa23.87■■□□□ 1.41
SOX2-OT-256ENST00000630482 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
SOX2-OT-256ENST00000630482 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
SOX2-OT-256ENST00000630482 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
SOX2-OT-256ENST00000630482 PEG3Q9GZU2 1588 aa23.68■■□□□ 1.38
SOX2-OT-256ENST00000630482 ERCC6Q03468 1493 aa23.67■■□□□ 1.38
SOX2-OT-256ENST00000630482 BAZ1BQ9UIG0 1483 aaKnown RBP23.66■■□□□ 1.38
SOX2-OT-256ENST00000630482 NESP48681 1621 aa23.64■■□□□ 1.38
SOX2-OT-256ENST00000630482 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
SOX2-OT-256ENST00000630482 CUX2O14529 1486 aa23.61■■□□□ 1.37
SOX2-OT-256ENST00000630482 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
SOX2-OT-256ENST00000630482 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
SOX2-OT-256ENST00000630482 WIZO95785 1651 aa23.46■■□□□ 1.35
SOX2-OT-256ENST00000630482 DNAJC5Q9H3Z4 198 aa23.46■■□□□ 1.35
SOX2-OT-256ENST00000630482 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
SOX2-OT-256ENST00000630482 PDS5BQ9NTI5 1447 aa23.18■■□□□ 1.3
SOX2-OT-256ENST00000630482 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.29
SOX2-OT-256ENST00000630482 WDR62O43379 1518 aa23.08■■□□□ 1.28
SOX2-OT-256ENST00000630482 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
SOX2-OT-256ENST00000630482 PRDM2Q13029 1718 aa23.06■■□□□ 1.28
SOX2-OT-256ENST00000630482 TOP2AP11388 1531 aaKnown RBP23.06■■□□□ 1.28
SOX2-OT-256ENST00000630482 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
SOX2-OT-256ENST00000630482 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
SOX2-OT-256ENST00000630482 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
SOX2-OT-256ENST00000630482 CFTRP13569 1480 aa22.92■■□□□ 1.26
SOX2-OT-256ENST00000630482 URB2Q14146 1524 aaKnown RBP22.82■■□□□ 1.24
SOX2-OT-256ENST00000630482 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
SOX2-OT-256ENST00000630482 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
SOX2-OT-256ENST00000630482 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
SOX2-OT-256ENST00000630482 TRIM41Q8WV44 630 aa22.52■■□□□ 1.2
SOX2-OT-256ENST00000630482 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
SOX2-OT-256ENST00000630482 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
SOX2-OT-256ENST00000630482 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
SOX2-OT-256ENST00000630482 CHD1O14646 1710 aa22.45■■□□□ 1.18
SOX2-OT-256ENST00000630482 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
SOX2-OT-256ENST00000630482 ABCC8Q09428 1581 aa22.41■■□□□ 1.18
SOX2-OT-256ENST00000630482 RIMBP3CA6NJZ7 1639 aa22.4■■□□□ 1.18
SOX2-OT-256ENST00000630482 RIMBP3BA6NNM3 1639 aa22.4■■□□□ 1.18
SOX2-OT-256ENST00000630482 RIMBP3Q9UFD9 1639 aa22.4■■□□□ 1.18
SOX2-OT-256ENST00000630482 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
SOX2-OT-256ENST00000630482 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
SOX2-OT-256ENST00000630482 AQRO60306 1485 aaKnown RBP eCLIP22.28■■□□□ 1.166e-18■■■■□ 26.1
SOX2-OT-256ENST00000630482 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
SOX2-OT-256ENST00000630482 ARHGEF11O15085 1522 aa22.24■■□□□ 1.15
SOX2-OT-256ENST00000630482 WDR97A6NE52 1622 aa22.23■■□□□ 1.15
SOX2-OT-256ENST00000630482 CUX1P39880 1505 aa22.21■■□□□ 1.15
SOX2-OT-256ENST00000630482 FGD5Q6ZNL6 1462 aa22.2■■□□□ 1.14
SOX2-OT-256ENST00000630482 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
SOX2-OT-256ENST00000630482 SOGA1O94964 1423 aa22.13■■□□□ 1.13
SOX2-OT-256ENST00000630482 TDRD9Q8NDG6 1382 aaKnown RBP22.1■■□□□ 1.13
SOX2-OT-256ENST00000630482 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
SOX2-OT-256ENST00000630482 FBLN2P98095 1184 aa22.04■■□□□ 1.12
SOX2-OT-256ENST00000630482 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
SOX2-OT-256ENST00000630482 CLASP1Q7Z460 1538 aa22.02■■□□□ 1.12
SOX2-OT-256ENST00000630482 SUPT5HO00267 1087 aaKnown RBP22.01■■□□□ 1.11
SOX2-OT-256ENST00000630482 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
SOX2-OT-256ENST00000630482 MAGI1Q96QZ7 1491 aaPredicted RBP21.98■■□□□ 1.11
SOX2-OT-256ENST00000630482 SYNJ1O43426 1573 aa21.98■■□□□ 1.11
SOX2-OT-256ENST00000630482 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
SOX2-OT-256ENST00000630482 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
SOX2-OT-256ENST00000630482 CYB5RLQ6IPT4 315 aa21.93■■□□□ 1.1
SOX2-OT-256ENST00000630482 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
SOX2-OT-256ENST00000630482 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
SOX2-OT-256ENST00000630482 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
SOX2-OT-256ENST00000630482 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
SOX2-OT-256ENST00000630482 CHMP7Q8WUX9 453 aaPredicted RBP21.85■■□□□ 1.09
SOX2-OT-256ENST00000630482 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
SOX2-OT-256ENST00000630482 CEP170Q5SW79 1584 aa21.75■■□□□ 1.07
SOX2-OT-256ENST00000630482 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
SOX2-OT-256ENST00000630482 GRIN2AQ12879 1464 aa21.73■■□□□ 1.07
SOX2-OT-256ENST00000630482 ERCC6L2Q5T890 1561 aa21.73■■□□□ 1.07
SOX2-OT-256ENST00000630482 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
SOX2-OT-256ENST00000630482 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
SOX2-OT-256ENST00000630482 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
SOX2-OT-256ENST00000630482 NUP160Q12769 1436 aa21.63■■□□□ 1.05
SOX2-OT-256ENST00000630482 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
SOX2-OT-256ENST00000630482 RUSC2Q8N2Y8 1516 aa21.54■■□□□ 1.04
SOX2-OT-256ENST00000630482 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
SOX2-OT-256ENST00000630482 CUL7Q14999 1698 aa21.44■■□□□ 1.02
SOX2-OT-256ENST00000630482 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms