RNA–Protein interactions for RNA: ENST00000384205.1

RNU6-4P-201, Transcript of RNA, U6 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU6-4P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-4P-201ENST00000384205 AEBP2Q6ZN18 517 aaPredicted RBP15.68■□□□□ 0.1
RNU6-4P-201ENST00000384205 CHIC1Q5VXU3 224 aa14.55□□□□□ -0.08
RNU6-4P-201ENST00000384205 SENP3Q9H4L4 574 aaPredicted RBP13.42□□□□□ -0.26
RNU6-4P-201ENST00000384205 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
RNU6-4P-201ENST00000384205 POTEDQ86YR6 584 aa13.03□□□□□ -0.32
RNU6-4P-201ENST00000384205 FOXD1Q16676 465 aa12.63□□□□□ -0.39
RNU6-4P-201ENST00000384205 MSH5O43196 834 aa12.06□□□□□ -0.48
RNU6-4P-201ENST00000384205 PIAS4Q8N2W9 510 aaPredicted RBP11.6□□□□□ -0.55
RNU6-4P-201ENST00000384205 PLPPR3Q6T4P5 718 aa11.38□□□□□ -0.59
RNU6-4P-201ENST00000384205 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
RNU6-4P-201ENST00000384205 ADRA2BP18089 450 aa11.16□□□□□ -0.62
RNU6-4P-201ENST00000384205 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
RNU6-4P-201ENST00000384205 DMRT2Q9Y5R5 561 aa10.56□□□□□ -0.72
RNU6-4P-201ENST00000384205 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
RNU6-4P-201ENST00000384205 RNF39Q9H2S5 420 aa10.26□□□□□ -0.77
RNU6-4P-201ENST00000384205 SCAF1Q9H7N4 1312 aaKnown RBP10.14□□□□□ -0.79
RNU6-4P-201ENST00000384205 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
RNU6-4P-201ENST00000384205 POTEHQ6S545 545 aa10.05□□□□□ -0.8
RNU6-4P-201ENST00000384205 C1QBPQ07021 282 aaKnown RBP10.03□□□□□ -0.8
RNU6-4P-201ENST00000384205 PPP4R3CPQ6ZMV5 832 aa10□□□□□ -0.81
RNU6-4P-201ENST00000384205 HOXD11P31277 338 aaPredicted RBP9.89□□□□□ -0.83
RNU6-4P-201ENST00000384205 NCBP3Q53F19 620 aaKnown RBP9.84□□□□□ -0.83
RNU6-4P-201ENST00000384205 KCNA4P22459 653 aa9.82□□□□□ -0.84
RNU6-4P-201ENST00000384205 CNKSR2Q8WXI2 1034 aa9.74□□□□□ -0.85
RNU6-4P-201ENST00000384205 DNAJC5BQ9UF47 199 aa9.69□□□□□ -0.86
RNU6-4P-201ENST00000384205 NPM3O75607 178 aaKnown RBP9.6□□□□□ -0.87
RNU6-4P-201ENST00000384205 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
RNU6-4P-201ENST00000384205 SLC4A1APQ9BWU0 796 aaKnown RBP9.42□□□□□ -0.9
RNU6-4P-201ENST00000384205 DSG3P32926 999 aa9.36□□□□□ -0.91
RNU6-4P-201ENST00000384205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.35□□□□□ -0.91
RNU6-4P-201ENST00000384205 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
RNU6-4P-201ENST00000384205 CAPN15O75808 1086 aa9.19□□□□□ -0.94
RNU6-4P-201ENST00000384205 EHMT2Q96KQ7 1210 aa9.19□□□□□ -0.94
RNU6-4P-201ENST00000384205 U3KPZ7 1027 aaPredicted RBP9.16□□□□□ -0.94
RNU6-4P-201ENST00000384205 SP7Q8TDD2 431 aaPredicted RBP9.09□□□□□ -0.95
RNU6-4P-201ENST00000384205 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
RNU6-4P-201ENST00000384205 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
RNU6-4P-201ENST00000384205 SLC4A2P04920 1241 aa9.02□□□□□ -0.97
RNU6-4P-201ENST00000384205 CHRDL2Q6WN34 429 aa9.02□□□□□ -0.97
RNU6-4P-201ENST00000384205 ZBTB22O15209 634 aa9□□□□□ -0.97
RNU6-4P-201ENST00000384205 ABCB7O75027 752 aa8.94□□□□□ -0.98
RNU6-4P-201ENST00000384205 MYCNP04198 464 aaPredicted RBP8.92□□□□□ -0.98
RNU6-4P-201ENST00000384205 RBM42Q9BTD8 480 aaKnown RBP8.9□□□□□ -0.98
RNU6-4P-201ENST00000384205 TRHP20396 242 aaPredicted RBP8.87□□□□□ -0.99
RNU6-4P-201ENST00000384205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
RNU6-4P-201ENST00000384205 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
RNU6-4P-201ENST00000384205 ZNF219Q9P2Y4 722 aaPredicted RBP8.84□□□□□ -0.99
RNU6-4P-201ENST00000384205 ATXN8OSP0DMR3 200 aa8.81□□□□□ -1
RNU6-4P-201ENST00000384205 SAMD1Q6SPF0 538 aaPredicted RBP8.8□□□□□ -1
RNU6-4P-201ENST00000384205 APLP2Q06481 763 aa8.78□□□□□ -1
RNU6-4P-201ENST00000384205 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
RNU6-4P-201ENST00000384205 HAX1O00165 279 aa8.65□□□□□ -1.02
RNU6-4P-201ENST00000384205 ATF5Q9Y2D1 282 aaPredicted RBP8.57□□□□□ -1.04
RNU6-4P-201ENST00000384205 EVX2Q03828 476 aa8.56□□□□□ -1.04
RNU6-4P-201ENST00000384205 AKT1S1Q96B36 256 aa8.56□□□□□ -1.04
RNU6-4P-201ENST00000384205 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
RNU6-4P-201ENST00000384205 FXR2P51116 673 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU6-4P-201ENST00000384205 LHX8Q68G74 356 aa8.49□□□□□ -1.05
RNU6-4P-201ENST00000384205 REM2Q8IYK8 340 aaPredicted RBP8.49□□□□□ -1.05
RNU6-4P-201ENST00000384205 POLA2Q14181 598 aa8.48□□□□□ -1.05
RNU6-4P-201ENST00000384205 PITPNM1O00562 1244 aa8.43□□□□□ -1.06
RNU6-4P-201ENST00000384205 ZBTB12Q9Y330 459 aaPredicted RBP8.36□□□□□ -1.07
RNU6-4P-201ENST00000384205 FBLN2P98095 1184 aa8.33□□□□□ -1.08
RNU6-4P-201ENST00000384205 GABBR2O75899 941 aa8.3□□□□□ -1.08
RNU6-4P-201ENST00000384205 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
RNU6-4P-201ENST00000384205 C19orf67A6NJJ6 358 aa8.26□□□□□ -1.09
RNU6-4P-201ENST00000384205 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
RNU6-4P-201ENST00000384205 FKBP8Q14318 412 aa8.21□□□□□ -1.1
RNU6-4P-201ENST00000384205 PRKAR2AP13861 404 aaKnown RBP8.18□□□□□ -1.1
RNU6-4P-201ENST00000384205 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
RNU6-4P-201ENST00000384205 SPDYE4A6NLX3 237 aa8.14□□□□□ -1.11
RNU6-4P-201ENST00000384205 SPDYE2BA6NHP3 402 aa8.1□□□□□ -1.11
RNU6-4P-201ENST00000384205 SPDYE6P0CI01 402 aa8.1□□□□□ -1.11
RNU6-4P-201ENST00000384205 SPDYE2Q495Y8 402 aa8.1□□□□□ -1.11
RNU6-4P-201ENST00000384205 ZNF692Q9BU19 519 aaPredicted RBP8.06□□□□□ -1.12
RNU6-4P-201ENST00000384205 POTEMA6NI47 508 aa8.05□□□□□ -1.12
RNU6-4P-201ENST00000384205 PROM2Q8N271 834 aa8.02□□□□□ -1.13
RNU6-4P-201ENST00000384205 SSUH2Q9Y2M2 353 aa8.01□□□□□ -1.13
RNU6-4P-201ENST00000384205 POTEGQ6S5H5 508 aa8□□□□□ -1.13
RNU6-4P-201ENST00000384205 FBXO3Q9UK99 471 aa8□□□□□ -1.13
RNU6-4P-201ENST00000384205 OTUD5Q96G74 571 aa7.97□□□□□ -1.13
RNU6-4P-201ENST00000384205 CLEC11AQ9Y240 323 aa7.97□□□□□ -1.13
RNU6-4P-201ENST00000384205 SPDYE1Q8NFV5 336 aaPredicted RBP7.96□□□□□ -1.14
RNU6-4P-201ENST00000384205 CHADLQ6NUI6 762 aa7.94□□□□□ -1.14
RNU6-4P-201ENST00000384205 PABPN1Q86U42 306 aaKnown RBP eCLIP7.93□□□□□ -1.14
RNU6-4P-201ENST00000384205 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
RNU6-4P-201ENST00000384205 STAG3Q9UJ98 1225 aa7.91□□□□□ -1.14
RNU6-4P-201ENST00000384205 POTEB2H3BUK9 544 aa7.87□□□□□ -1.15
RNU6-4P-201ENST00000384205 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
RNU6-4P-201ENST00000384205 CLCN6P51797 869 aa7.87□□□□□ -1.15
RNU6-4P-201ENST00000384205 DCBLD2Q96PD2 775 aa7.87□□□□□ -1.15
RNU6-4P-201ENST00000384205 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
RNU6-4P-201ENST00000384205 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
RNU6-4P-201ENST00000384205 PLEKHG5O94827 1062 aa7.75□□□□□ -1.17
RNU6-4P-201ENST00000384205 ZNF579Q8NAF0 562 aaKnown RBP7.75□□□□□ -1.17
RNU6-4P-201ENST00000384205 PRR29P0C7W0 189 aa7.73□□□□□ -1.17
RNU6-4P-201ENST00000384205 PLCD3Q8N3E9 789 aa7.73□□□□□ -1.17
RNU6-4P-201ENST00000384205 FARP1Q9Y4F1 1045 aaPredicted RBP7.73□□□□□ -1.17
RNU6-4P-201ENST00000384205 MIER1Q8N108 512 aa7.72□□□□□ -1.17
RNU6-4P-201ENST00000384205 AMER1Q5JTC6 1135 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms