RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 AEBP2Q6ZN18 517 aaPredicted RBP27.61■■■□□ 2.01
SOX2-OT-204ENST00000469278 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
SOX2-OT-204ENST00000469278 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
SOX2-OT-204ENST00000469278 PHF23Q9BUL5 403 aaPredicted RBP23.3■■□□□ 1.32
SOX2-OT-204ENST00000469278 FOXD1Q16676 465 aa22.07■■□□□ 1.12
SOX2-OT-204ENST00000469278 MSH5O43196 834 aa20.84■□□□□ 0.93
SOX2-OT-204ENST00000469278 POTEDQ86YR6 584 aa20.83■□□□□ 0.93
SOX2-OT-204ENST00000469278 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
SOX2-OT-204ENST00000469278 PIAS4Q8N2W9 510 aaPredicted RBP20.62■□□□□ 0.89
SOX2-OT-204ENST00000469278 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
SOX2-OT-204ENST00000469278 ADRA2BP18089 450 aa20.32■□□□□ 0.84
SOX2-OT-204ENST00000469278 MAPK8IP2Q13387 824 aaPredicted RBP18.74■□□□□ 0.59
SOX2-OT-204ENST00000469278 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
SOX2-OT-204ENST00000469278 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
SOX2-OT-204ENST00000469278 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
SOX2-OT-204ENST00000469278 DCAF8L1A6NGE4 600 aa18.07■□□□□ 0.48
SOX2-OT-204ENST00000469278 PPP4R3CPQ6ZMV5 832 aa18.03■□□□□ 0.48
SOX2-OT-204ENST00000469278 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
SOX2-OT-204ENST00000469278 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
SOX2-OT-204ENST00000469278 RNF39Q9H2S5 420 aa17.7■□□□□ 0.42
SOX2-OT-204ENST00000469278 RNF216Q9NWF9 866 aaPredicted RBP17.68■□□□□ 0.42
SOX2-OT-204ENST00000469278 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
SOX2-OT-204ENST00000469278 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
SOX2-OT-204ENST00000469278 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
SOX2-OT-204ENST00000469278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
SOX2-OT-204ENST00000469278 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
SOX2-OT-204ENST00000469278 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
SOX2-OT-204ENST00000469278 CAPN15O75808 1086 aa16.58■□□□□ 0.24
SOX2-OT-204ENST00000469278 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
SOX2-OT-204ENST00000469278 DSG3P32926 999 aa16.48■□□□□ 0.23
SOX2-OT-204ENST00000469278 KCNA4P22459 653 aa16.38■□□□□ 0.21
SOX2-OT-204ENST00000469278 POTEHQ6S545 545 aa16.29■□□□□ 0.2
SOX2-OT-204ENST00000469278 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
SOX2-OT-204ENST00000469278 APLP2Q06481 763 aa16.26■□□□□ 0.19
SOX2-OT-204ENST00000469278 TRHP20396 242 aaPredicted RBP16.22■□□□□ 0.19
SOX2-OT-204ENST00000469278 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-204ENST00000469278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-204ENST00000469278 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
SOX2-OT-204ENST00000469278 ABCB7O75027 752 aa16.14■□□□□ 0.17
SOX2-OT-204ENST00000469278 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-204ENST00000469278 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
SOX2-OT-204ENST00000469278 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
SOX2-OT-204ENST00000469278 POLA2Q14181 598 aa15.68■□□□□ 0.1
SOX2-OT-204ENST00000469278 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
SOX2-OT-204ENST00000469278 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
SOX2-OT-204ENST00000469278 FOXD4L1Q9NU39 408 aa15.41■□□□□ 0.06
SOX2-OT-204ENST00000469278 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
SOX2-OT-204ENST00000469278 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
SOX2-OT-204ENST00000469278 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
SOX2-OT-204ENST00000469278 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
SOX2-OT-204ENST00000469278 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-204ENST00000469278 SP7Q8TDD2 431 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-204ENST00000469278 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
SOX2-OT-204ENST00000469278 PITPNM1O00562 1244 aa15.03■□□□□ -0
SOX2-OT-204ENST00000469278 ZBTB22O15209 634 aa15.01□□□□□ -0.01
SOX2-OT-204ENST00000469278 HAX1O00165 279 aa14.95□□□□□ -0.02
SOX2-OT-204ENST00000469278 ATXN8OSP0DMR3 200 aa14.95□□□□□ -0.02
SOX2-OT-204ENST00000469278 FXR2P51116 673 aaKnown RBP eCLIP14.93□□□□□ -0.02
SOX2-OT-204ENST00000469278 FBLN2P98095 1184 aa14.89□□□□□ -0.03
SOX2-OT-204ENST00000469278 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
SOX2-OT-204ENST00000469278 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
SOX2-OT-204ENST00000469278 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
SOX2-OT-204ENST00000469278 CLEC11AQ9Y240 323 aa14.71□□□□□ -0.05
SOX2-OT-204ENST00000469278 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
SOX2-OT-204ENST00000469278 PRKAR2AP13861 404 aaKnown RBP14.66□□□□□ -0.06
SOX2-OT-204ENST00000469278 EVX2Q03828 476 aa14.64□□□□□ -0.07
SOX2-OT-204ENST00000469278 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
SOX2-OT-204ENST00000469278 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-204ENST00000469278 SSUH2Q9Y2M2 353 aa14.57□□□□□ -0.08
SOX2-OT-204ENST00000469278 C19orf67A6NJJ6 358 aa14.47□□□□□ -0.09
SOX2-OT-204ENST00000469278 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
SOX2-OT-204ENST00000469278 CHADLQ6NUI6 762 aa14.4□□□□□ -0.1
SOX2-OT-204ENST00000469278 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
SOX2-OT-204ENST00000469278 GABBR2O75899 941 aa14.35□□□□□ -0.11
SOX2-OT-204ENST00000469278 LHX8Q68G74 356 aa14.19□□□□□ -0.14
SOX2-OT-204ENST00000469278 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
SOX2-OT-204ENST00000469278 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
SOX2-OT-204ENST00000469278 CSRNP3Q8WYN3 585 aa14.05□□□□□ -0.16
SOX2-OT-204ENST00000469278 CLCN6P51797 869 aa14.04□□□□□ -0.16
SOX2-OT-204ENST00000469278 POTEIP0CG38 1075 aa13.99□□□□□ -0.17
SOX2-OT-204ENST00000469278 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
SOX2-OT-204ENST00000469278 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
SOX2-OT-204ENST00000469278 ZRANB1Q9UGI0 708 aa13.94□□□□□ -0.18
SOX2-OT-204ENST00000469278 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
SOX2-OT-204ENST00000469278 CREBZFQ9NS37 354 aa13.91□□□□□ -0.18
SOX2-OT-204ENST00000469278 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
SOX2-OT-204ENST00000469278 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
SOX2-OT-204ENST00000469278 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
SOX2-OT-204ENST00000469278 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.21
SOX2-OT-204ENST00000469278 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
SOX2-OT-204ENST00000469278 PHF12Q96QT6 1004 aa13.69□□□□□ -0.22
SOX2-OT-204ENST00000469278 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-204ENST00000469278 PLSCR2Q9NRY7 297 aa13.59□□□□□ -0.23
SOX2-OT-204ENST00000469278 OTUD5Q96G74 571 aa13.56□□□□□ -0.24
SOX2-OT-204ENST00000469278 POTEB2H3BUK9 544 aa13.52□□□□□ -0.25
SOX2-OT-204ENST00000469278 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
SOX2-OT-204ENST00000469278 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
SOX2-OT-204ENST00000469278 ASTLQ6HA08 431 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-204ENST00000469278 TSPYL2Q9H2G4 693 aaPredicted RBP13.45□□□□□ -0.26
SOX2-OT-204ENST00000469278 METRNQ9UJH8 293 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms