RNA–Protein interactions for RNA: ENST00000597347.5

SOX2-OT-226, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 1,342 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-226ENST00000597347 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
SOX2-OT-226ENST00000597347 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
SOX2-OT-226ENST00000597347 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
SOX2-OT-226ENST00000597347 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
SOX2-OT-226ENST00000597347 ABCC9O60706 1549 aa20.76■□□□□ 0.91
SOX2-OT-226ENST00000597347 NACADO15069 1562 aa20.06■□□□□ 0.8
SOX2-OT-226ENST00000597347 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
SOX2-OT-226ENST00000597347 RB1CC1Q8TDY2 1594 aa20.04■□□□□ 0.8
SOX2-OT-226ENST00000597347 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
SOX2-OT-226ENST00000597347 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
SOX2-OT-226ENST00000597347 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
SOX2-OT-226ENST00000597347 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
SOX2-OT-226ENST00000597347 PABPN1Q86U42 306 aaKnown RBP eCLIP19.42■□□□□ 0.7
SOX2-OT-226ENST00000597347 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
SOX2-OT-226ENST00000597347 UNC13AQ9UPW8 1703 aa19.4■□□□□ 0.7
SOX2-OT-226ENST00000597347 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
SOX2-OT-226ENST00000597347 PHF23Q9BUL5 403 aaPredicted RBP19.34■□□□□ 0.69
SOX2-OT-226ENST00000597347 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
SOX2-OT-226ENST00000597347 SCRIBQ14160 1630 aa19.17■□□□□ 0.66
SOX2-OT-226ENST00000597347 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
SOX2-OT-226ENST00000597347 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
SOX2-OT-226ENST00000597347 CECR2Q9BXF3 1484 aa18.74■□□□□ 0.59
SOX2-OT-226ENST00000597347 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
SOX2-OT-226ENST00000597347 BAZ1AQ9NRL2 1556 aaPredicted RBP18.49■□□□□ 0.55
SOX2-OT-226ENST00000597347 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
SOX2-OT-226ENST00000597347 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
SOX2-OT-226ENST00000597347 SMARCA2P51531 1590 aa18.44■□□□□ 0.54
SOX2-OT-226ENST00000597347 PEG3Q9GZU2 1588 aa18.41■□□□□ 0.54
SOX2-OT-226ENST00000597347 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
SOX2-OT-226ENST00000597347 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
SOX2-OT-226ENST00000597347 BAZ1BQ9UIG0 1483 aaKnown RBP18.24■□□□□ 0.51
SOX2-OT-226ENST00000597347 FOXD1Q16676 465 aa18.22■□□□□ 0.51
SOX2-OT-226ENST00000597347 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
SOX2-OT-226ENST00000597347 WIZO95785 1651 aa18.03■□□□□ 0.48
SOX2-OT-226ENST00000597347 LAMC3Q9Y6N6 1575 aa17.99■□□□□ 0.47
SOX2-OT-226ENST00000597347 CADPSQ9ULU8 1353 aa17.99■□□□□ 0.47
SOX2-OT-226ENST00000597347 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
SOX2-OT-226ENST00000597347 NESP48681 1621 aa17.93■□□□□ 0.46
SOX2-OT-226ENST00000597347 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
SOX2-OT-226ENST00000597347 CUX2O14529 1486 aa17.92■□□□□ 0.46
SOX2-OT-226ENST00000597347 ERCC6Q03468 1493 aa17.92■□□□□ 0.46
SOX2-OT-226ENST00000597347 CFTRP13569 1480 aa17.85■□□□□ 0.45
SOX2-OT-226ENST00000597347 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
SOX2-OT-226ENST00000597347 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-226ENST00000597347 PLPPR3Q6T4P5 718 aa17.69■□□□□ 0.42
SOX2-OT-226ENST00000597347 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
SOX2-OT-226ENST00000597347 MRC2Q9UBG0 1479 aa17.67■□□□□ 0.42
SOX2-OT-226ENST00000597347 CEP164Q9UPV0 1460 aa17.65■□□□□ 0.42
SOX2-OT-226ENST00000597347 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
SOX2-OT-226ENST00000597347 WDR62O43379 1518 aa17.62■□□□□ 0.41
SOX2-OT-226ENST00000597347 DNAJC5Q9H3Z4 198 aa17.55■□□□□ 0.4
SOX2-OT-226ENST00000597347 ABCC8Q09428 1581 aa17.52■□□□□ 0.4
SOX2-OT-226ENST00000597347 PRDM2Q13029 1718 aa17.49■□□□□ 0.39
SOX2-OT-226ENST00000597347 URB2Q14146 1524 aaKnown RBP17.48■□□□□ 0.39
SOX2-OT-226ENST00000597347 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
SOX2-OT-226ENST00000597347 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
SOX2-OT-226ENST00000597347 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
SOX2-OT-226ENST00000597347 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
SOX2-OT-226ENST00000597347 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
SOX2-OT-226ENST00000597347 SOGA1O94964 1423 aa17.21■□□□□ 0.35
SOX2-OT-226ENST00000597347 OSCARQ8IYS5 282 aa17.21■□□□□ 0.34
SOX2-OT-226ENST00000597347 TARBP1Q13395 1621 aaKnown RBP17.19■□□□□ 0.34
SOX2-OT-226ENST00000597347 CUX1P39880 1505 aa17.18■□□□□ 0.34
SOX2-OT-226ENST00000597347 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
SOX2-OT-226ENST00000597347 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
SOX2-OT-226ENST00000597347 FGD5Q6ZNL6 1462 aa17.13■□□□□ 0.33
SOX2-OT-226ENST00000597347 PPP6R1Q9UPN7 881 aa17.11■□□□□ 0.33
SOX2-OT-226ENST00000597347 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.336e-18■■■■□ 26.1
SOX2-OT-226ENST00000597347 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
SOX2-OT-226ENST00000597347 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
SOX2-OT-226ENST00000597347 ADRA2BP18089 450 aa17.09■□□□□ 0.33
SOX2-OT-226ENST00000597347 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.33
SOX2-OT-226ENST00000597347 MSH5O43196 834 aa17.06■□□□□ 0.32
SOX2-OT-226ENST00000597347 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
SOX2-OT-226ENST00000597347 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
SOX2-OT-226ENST00000597347 EIF4G3O43432 1585 aaKnown RBP17.05■□□□□ 0.32
SOX2-OT-226ENST00000597347 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
SOX2-OT-226ENST00000597347 GRIN2BQ13224 1484 aa17.01■□□□□ 0.31
SOX2-OT-226ENST00000597347 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
SOX2-OT-226ENST00000597347 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
SOX2-OT-226ENST00000597347 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
SOX2-OT-226ENST00000597347 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
SOX2-OT-226ENST00000597347 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
SOX2-OT-226ENST00000597347 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
SOX2-OT-226ENST00000597347 ABCA5Q8WWZ7 1642 aa16.9■□□□□ 0.3
SOX2-OT-226ENST00000597347 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
SOX2-OT-226ENST00000597347 FBLN2P98095 1184 aa16.87■□□□□ 0.29
SOX2-OT-226ENST00000597347 ERICH3Q5RHP9 1530 aa16.85■□□□□ 0.29
SOX2-OT-226ENST00000597347 FHAD1B1AJZ9 1412 aa16.82■□□□□ 0.28
SOX2-OT-226ENST00000597347 CHD1O14646 1710 aa16.8■□□□□ 0.28
SOX2-OT-226ENST00000597347 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
SOX2-OT-226ENST00000597347 ARHGEF11O15085 1522 aa16.77■□□□□ 0.28
SOX2-OT-226ENST00000597347 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.28
SOX2-OT-226ENST00000597347 IGF1RP08069 1367 aa16.77■□□□□ 0.27
SOX2-OT-226ENST00000597347 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
SOX2-OT-226ENST00000597347 NUP160Q12769 1436 aa16.75■□□□□ 0.27
SOX2-OT-226ENST00000597347 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
SOX2-OT-226ENST00000597347 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
SOX2-OT-226ENST00000597347 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
SOX2-OT-226ENST00000597347 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms