Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 CICP24-201ENST00000605464 2705 ntBASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 SNX33P1-201ENST00000592116 1762 ntBASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 FAM8A6P-201ENST00000407496 1135 ntBASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 TSPY15P-201ENST00000457163 923 ntBASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 AC013467.2-201ENST00000605472 835 ntBASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLPTM1LQ96KA5 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 AL512652.2-201ENST00000625156 1716 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 FAM220CP-201ENST00000395253 831 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 AC008550.1-201ENST00000511500 884 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 AL441883.1-201ENST00000566170 1045 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 AL138831.2-201ENST00000606564 490 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 AL138966.2-201ENST00000621997 464 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 KRT8P49-201ENST00000604166 1432 ntBASIC16■□□□□ 0.15
CLPTM1LQ96KA5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16■□□□□ 0.15
CLPTM1LQ96KA5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 AC016027.1-202ENST00000607927 1699 ntBASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 AC006486.2-201ENST00000624246 2199 ntBASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 AC003669.1-201ENST00000334569 611 ntBASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 KLF4P1-201ENST00000412782 1185 ntBASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.99■□□□□ 0.15
CLPTM1LQ96KA5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms