Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNRPEP62304 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNRPEP62304 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SNRPEP62304 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.71□□□□□ -0.37
SNRPEP62304 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.71□□□□□ -0.38
SNRPEP62304 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
SNRPEP62304 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 PARN-202ENST00000420015 2360 ntTSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
SNRPEP62304 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
SNRPEP62304 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
SNRPEP62304 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.71□□□□□ -0.38
SNRPEP62304 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SNRPEP62304 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SNRPEP62304 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.7□□□□□ -0.38
SNRPEP62304 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SNRPEP62304 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 POU5F1P3-201ENST00000428824 1078 ntBASIC12.7□□□□□ -0.38
SNRPEP62304 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.7□□□□□ -0.38
SNRPEP62304 HES2-206ENST00000489730 730 ntTSL 2 BASIC12.7□□□□□ -0.38
SNRPEP62304 MBP-237ENST00000579129 1052 ntTSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.7□□□□□ -0.38
SNRPEP62304 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 AL139327.4-201ENST00000612362 153 ntBASIC12.7□□□□□ -0.38
SNRPEP62304 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 AC019294.4-201ENST00000561777 2905 ntBASIC12.7□□□□□ -0.38
SNRPEP62304 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.7□□□□□ -0.38
SNRPEP62304 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.7□□□□□ -0.38
SNRPEP62304 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SNRPEP62304 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SNRPEP62304 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SNRPEP62304 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 MROH4P-201ENST00000431302 1578 ntBASIC12.69□□□□□ -0.38
SNRPEP62304 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SNRPEP62304 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC12.69□□□□□ -0.38
SNRPEP62304 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SNRPEP62304 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.69□□□□□ -0.38
SNRPEP62304 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SNRPEP62304 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.69□□□□□ -0.38
SNRPEP62304 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.69□□□□□ -0.38
SNRPEP62304 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC12.69□□□□□ -0.38
SNRPEP62304 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SNRPEP62304 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.69□□□□□ -0.38
SNRPEP62304 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SNRPEP62304 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms