Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.268e-15■□□□□ 8.7
NCBP2P52298 TAF1C-212ENST00000564774 4637 ntTSL 213.44□□□□□ -0.261e-7■□□□□ 8.7
NCBP2P52298 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.272e-6■□□□□ 8.7
NCBP2P52298 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.285e-6■□□□□ 8.7
NCBP2P52298 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.281e-7■□□□□ 8.7
NCBP2P52298 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.291e-7■□□□□ 8.7
NCBP2P52298 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.325e-6■□□□□ 8.7
NCBP2P52298 DPP9-212ENST00000598041 542 ntTSL 413.01□□□□□ -0.336e-8■□□□□ 8.7
NCBP2P52298 ENO2-212ENST00000542509 825 ntTSL 512.94□□□□□ -0.345e-6■□□□□ 8.7
NCBP2P52298 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.351e-7■□□□□ 8.7
NCBP2P52298 FDFT1-215ENST00000529464 932 ntTSL 1 (best)12.87□□□□□ -0.355e-6■□□□□ 8.7
NCBP2P52298 ABCC3-212ENST00000513511 1042 ntTSL 512.84□□□□□ -0.355e-6■□□□□ 8.7
NCBP2P52298 DCTD-209ENST00000508994 332 ntTSL 412.8□□□□□ -0.361e-7■□□□□ 8.7
NCBP2P52298 DCTD-208ENST00000507631 879 ntTSL 1 (best)12.79□□□□□ -0.361e-7■□□□□ 8.7
NCBP2P52298 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.7□□□□□ -0.382e-6■□□□□ 8.7
NCBP2P52298 TAF1C-214ENST00000565544 578 ntTSL 412.57□□□□□ -0.41e-7■□□□□ 8.7
NCBP2P52298 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.45e-6■□□□□ 8.7
NCBP2P52298 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.54□□□□□ -0.45e-6■□□□□ 8.7
NCBP2P52298 TFR2-206ENST00000465294 2763 ntTSL 212.46□□□□□ -0.415e-6■□□□□ 8.7
NCBP2P52298 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.445e-6■□□□□ 8.7
NCBP2P52298 ENO2-206ENST00000536199 823 ntTSL 512.27□□□□□ -0.455e-6■□□□□ 8.7
NCBP2P52298 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.455e-6■□□□□ 8.7
NCBP2P52298 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.2□□□□□ -0.465e-6■□□□□ 8.7
NCBP2P52298 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.2□□□□□ -0.466e-8■□□□□ 8.7
NCBP2P52298 DCTD-215ENST00000513348 615 ntTSL 312.19□□□□□ -0.461e-7■□□□□ 8.7
NCBP2P52298 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.471e-7■□□□□ 8.7
NCBP2P52298 ABCC3-203ENST00000502426 5326 ntTSL 212.09□□□□□ -0.475e-6■□□□□ 8.7
NCBP2P52298 DCTD-207ENST00000507543 1874 ntTSL 512.08□□□□□ -0.481e-7■□□□□ 8.7
NCBP2P52298 WDR6-217ENST00000491365 491 ntTSL 312.01□□□□□ -0.495e-6■□□□□ 8.7
NCBP2P52298 ABCC3-207ENST00000505699 5271 ntTSL 211.94□□□□□ -0.55e-6■□□□□ 8.7
NCBP2P52298 ENO2-208ENST00000537838 541 ntTSL 411.89□□□□□ -0.515e-6■□□□□ 8.7
NCBP2P52298 WDR6-215ENST00000489427 564 ntTSL 411.86□□□□□ -0.515e-6■□□□□ 8.7
NCBP2P52298 TAF1C-218ENST00000567759 3879 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.581e-7■□□□□ 8.7
NCBP2P52298 FDFT1-204ENST00000525283 898 ntTSL 311.38□□□□□ -0.595e-6■□□□□ 8.7
NCBP2P52298 TF-201ENST00000402696 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.596e-8■□□□□ 8.7
NCBP2P52298 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.66e-8■□□□□ 8.7
NCBP2P52298 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.611e-7■□□□□ 8.7
NCBP2P52298 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC11.19□□□□□ -0.625e-6■□□□□ 8.7
NCBP2P52298 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.635e-6■□□□□ 8.7
NCBP2P52298 CLPX-204ENST00000559152 2228 ntTSL 1 (best)10.69□□□□□ -0.74e-12■□□□□ 8.7
NCBP2P52298 TAF1C-209ENST00000564208 3810 ntTSL 210.69□□□□□ -0.71e-7■□□□□ 8.7
NCBP2P52298 NUP107-205ENST00000535718 2655 ntTSL 1 (best)10.14□□□□□ -0.795e-6■□□□□ 8.7
NCBP2P52298 RFC2-204ENST00000470266 881 ntTSL 59.55□□□□□ -0.885e-6■□□□□ 8.7
NCBP2P52298 KDM6B-204ENST00000571047 362 ntTSL 59.43□□□□□ -0.95e-6■□□□□ 8.7
NCBP2P52298 RFC2-211ENST00000494019 730 ntTSL 39.4□□□□□ -0.95e-6■□□□□ 8.7
NCBP2P52298 RFC2-205ENST00000473493 304 ntTSL 39.03□□□□□ -0.965e-6■□□□□ 8.7
NCBP2P52298 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.975e-6■□□□□ 8.7
NCBP2P52298 RFC2-206ENST00000479105 957 ntTSL 58.4□□□□□ -1.065e-6■□□□□ 8.7
NCBP2P52298 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.075e-6■□□□□ 8.7
NCBP2P52298 DCTD-204ENST00000503182 578 ntTSL 48.34□□□□□ -1.071e-7■□□□□ 8.7
NCBP2P52298 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.145e-6■□□□□ 8.7
NCBP2P52298 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.73□□□□□ -1.175e-6■□□□□ 8.7
NCBP2P52298 NPM1-208ENST00000521672 597 ntTSL 57.66□□□□□ -1.185e-6■□□□□ 8.7
NCBP2P52298 FDFT1-211ENST00000527045 642 ntTSL 1 (best)7.34□□□□□ -1.235e-6■□□□□ 8.7
NCBP2P52298 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.315e-6■□□□□ 8.7
NCBP2P52298 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.63□□□□□ -1.352e-6■□□□□ 8.7
NCBP2P52298 VDAC1-205ENST00000466080 831 ntTSL 36.46□□□□□ -1.385e-6■□□□□ 8.7
NCBP2P52298 NUP107-204ENST00000535333 683 ntTSL 36.46□□□□□ -1.385e-6■□□□□ 8.7
NCBP2P52298 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.12□□□□□ -1.436e-8■□□□□ 8.7
NCBP2P52298 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.79□□□□□ -1.482e-9■□□□□ 8.7
NCBP2P52298 DCTD-211ENST00000509757 564 ntTSL 45.72□□□□□ -1.491e-7■□□□□ 8.7
NCBP2P52298 NPM1-205ENST00000518587 670 ntTSL 25.6□□□□□ -1.515e-6■□□□□ 8.7
NCBP2P52298 NUP107-206ENST00000537598 695 ntTSL 35.2□□□□□ -1.585e-6■□□□□ 8.7
NCBP2P52298 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.06□□□□□ -1.65e-6■□□□□ 8.7
NCBP2P52298 NUP107-212ENST00000540453 573 ntTSL 25.04□□□□□ -1.65e-6■□□□□ 8.7
NCBP2P52298 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.88□□□□□ -1.635e-6■□□□□ 8.7
NCBP2P52298 NPM1-211ENST00000523622 247 ntTSL 34.88□□□□□ -1.635e-6■□□□□ 8.7
NCBP2P52298 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.87□□□□□ -1.635e-6■□□□□ 8.7
NCBP2P52298 NPM1-210ENST00000523339 268 ntTSL 23.23□□□□□ -1.895e-6■□□□□ 8.7
NCBP2P52298 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.158e-14■□□□□ 8.7
NCBP2P52298 DDX6-205ENST00000533239 738 ntTSL 214.85□□□□□ -0.031e-7■□□□□ 8.6
NCBP2P52298 DDX6-201ENST00000525082 1232 ntTSL 29.55□□□□□ -0.881e-7■□□□□ 8.6
NCBP2P52298 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.57□□□□□ -1.521e-7■□□□□ 8.6
NCBP2P52298 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.011e-7■□□□□ 8.6
NCBP2P52298 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.69■□□□□ 0.743e-17■□□□□ 8.6
NCBP2P52298 HNRNPLL-211ENST00000498516 655 ntTSL 319.17■□□□□ 0.663e-17■□□□□ 8.6
NCBP2P52298 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.06■□□□□ 0.483e-17■□□□□ 8.6
NCBP2P52298 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.12■□□□□ 0.173e-17■□□□□ 8.6
NCBP2P52298 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.29■□□□□ 0.043e-17■□□□□ 8.6
NCBP2P52298 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.1□□□□□ -0.153e-17■□□□□ 8.6
NCBP2P52298 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.33e-17■□□□□ 8.6
NCBP2P52298 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.338e-16■□□□□ 8.6
NCBP2P52298 HEPACAM-203ENST00000528971 946 ntTSL 29.52□□□□□ -0.898e-16■□□□□ 8.6
NCBP2P52298 CTSZ-202ENST00000472025 564 ntTSL 217.95■□□□□ 0.462e-10■□□□□ 8.6
NCBP2P52298 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.272e-7■□□□□ 8.6
NCBP2P52298 COMT-210ENST00000467943 546 ntTSL 222.36■■□□□ 1.172e-7■□□□□ 8.6
NCBP2P52298 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.95■□□□□ 0.942e-7■□□□□ 8.6
NCBP2P52298 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.942e-7■□□□□ 8.6
NCBP2P52298 GADD45A-204ENST00000484245 688 ntTSL 1 (best)19.91■□□□□ 0.782e-7■□□□□ 8.6
NCBP2P52298 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.712e-7■□□□□ 8.6
NCBP2P52298 GLYR1-206ENST00000587875 630 ntTSL 215.34■□□□□ 0.052e-7■□□□□ 8.6
NCBP2P52298 GLYR1-208ENST00000588297 580 ntTSL 315.02■□□□□ -02e-7■□□□□ 8.6
NCBP2P52298 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.412e-7■□□□□ 8.6
NCBP2P52298 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.572e-7■□□□□ 8.6
NCBP2P52298 GLYR1-202ENST00000436648 3466 ntTSL 2 BASIC10.98□□□□□ -0.652e-7■□□□□ 8.6
NCBP2P52298 GLYR1-209ENST00000588732 3527 ntTSL 1 (best)9.48□□□□□ -0.892e-7■□□□□ 8.6
NCBP2P52298 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.384e-13■□□□□ 8.6
NCBP2P52298 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.06□□□□□ -0.321e-8■□□□□ 8.6
NCBP2P52298 DDX46-202ENST00000452510 5689 ntTSL 1 (best) BASIC10.13□□□□□ -0.791e-8■□□□□ 8.6
NCBP2P52298 DDX46-207ENST00000507392 3565 ntTSL 27.97□□□□□ -1.131e-8■□□□□ 8.6
Retrieved 100 of 18,329 protein–RNA pairs in 502.4 ms