RNA–Protein interactions for RNA: ENST00000229179.8

NUP107-201, Transcript of nucleoporin 107, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP107, Length 6,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP107-201ENST00000229179 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
NUP107-201ENST00000229179 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
NUP107-201ENST00000229179 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
NUP107-201ENST00000229179 SHROOM4Q9ULL8 1493 aa13.64□□□□□ -0.23
NUP107-201ENST00000229179 TTBK1Q5TCY1 1321 aaPredicted RBP13.61□□□□□ -0.23
NUP107-201ENST00000229179 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.25
NUP107-201ENST00000229179 PELP1Q8IZL8 1130 aaKnown RBP13.45□□□□□ -0.26
NUP107-201ENST00000229179 APLP2Q06481 763 aa13.44□□□□□ -0.26
NUP107-201ENST00000229179 FAM9AQ8IZU1 332 aaPredicted RBP13.34□□□□□ -0.27
NUP107-201ENST00000229179 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.27
NUP107-201ENST00000229179 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
NUP107-201ENST00000229179 PCGF6Q9BYE7 350 aa13.1□□□□□ -0.31
NUP107-201ENST00000229179 CHIC1Q5VXU3 224 aa13.01□□□□□ -0.33
NUP107-201ENST00000229179 MYT1LQ9UL68 1186 aa13□□□□□ -0.33
NUP107-201ENST00000229179 MYT1Q01538 1121 aa12.9□□□□□ -0.34
NUP107-201ENST00000229179 CCER1Q8TC90 406 aaPredicted RBP12.9□□□□□ -0.34
NUP107-201ENST00000229179 YTHDC1Q96MU7 727 aaKnown RBP12.9□□□□□ -0.35
NUP107-201ENST00000229179 CNGB1Q14028 1251 aaPredicted RBP12.87□□□□□ -0.35
NUP107-201ENST00000229179 POLR3GLQ9BT43 218 aa12.86□□□□□ -0.35
NUP107-201ENST00000229179 UBTFP17480 764 aaKnown RBP12.8□□□□□ -0.36
NUP107-201ENST00000229179 PPARGC1BQ86YN6 1023 aaKnown RBP12.79□□□□□ -0.36
NUP107-201ENST00000229179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
NUP107-201ENST00000229179 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
NUP107-201ENST00000229179 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
NUP107-201ENST00000229179 NEFLP07196 543 aa12.74□□□□□ -0.37
NUP107-201ENST00000229179 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
NUP107-201ENST00000229179 ITGAEP38570 1179 aa12.68□□□□□ -0.38
NUP107-201ENST00000229179 TRIM41Q8WV44 630 aa12.68□□□□□ -0.38
NUP107-201ENST00000229179 DAXXQ9UER7 740 aaPredicted RBP12.61□□□□□ -0.39
NUP107-201ENST00000229179 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
NUP107-201ENST00000229179 BCL11AQ9H165 835 aa12.47□□□□□ -0.41
NUP107-201ENST00000229179 SLC24A1O60721 1099 aa12.44□□□□□ -0.42
NUP107-201ENST00000229179 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
NUP107-201ENST00000229179 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
NUP107-201ENST00000229179 ZNF316A6NFI3 1004 aaPredicted RBP12.31□□□□□ -0.44
NUP107-201ENST00000229179 PLPPR3Q6T4P5 718 aa12.3□□□□□ -0.44
NUP107-201ENST00000229179 BCANQ96GW7 911 aa12.28□□□□□ -0.44
NUP107-201ENST00000229179 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
NUP107-201ENST00000229179 TRIM52Q96A61 297 aa12.18□□□□□ -0.46
NUP107-201ENST00000229179 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
NUP107-201ENST00000229179 FBLN2P98095 1184 aa12.16□□□□□ -0.46
NUP107-201ENST00000229179 ZBTB47Q9UFB7 747 aaPredicted RBP12.12□□□□□ -0.47
NUP107-201ENST00000229179 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
NUP107-201ENST00000229179 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
NUP107-201ENST00000229179 ARID3CA6NKF2 412 aa12.08□□□□□ -0.48
NUP107-201ENST00000229179 LOC105371045A0A1W2PR82 267 aa12.05□□□□□ -0.48
NUP107-201ENST00000229179 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
NUP107-201ENST00000229179 TRIM26Q12899 539 aaPredicted RBP12□□□□□ -0.49
NUP107-201ENST00000229179 A0A0G2JS52 829 aa11.99□□□□□ -0.49
NUP107-201ENST00000229179 HRCP23327 699 aa11.97□□□□□ -0.49
NUP107-201ENST00000229179 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
NUP107-201ENST00000229179 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
NUP107-201ENST00000229179 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
NUP107-201ENST00000229179 NEFMP07197 916 aa11.91□□□□□ -0.5
NUP107-201ENST00000229179 SENP3Q9H4L4 574 aaPredicted RBP11.9□□□□□ -0.5
NUP107-201ENST00000229179 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
NUP107-201ENST00000229179 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
NUP107-201ENST00000229179 ZNF777Q9ULD5 760 aaPredicted RBP11.87□□□□□ -0.51
NUP107-201ENST00000229179 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
NUP107-201ENST00000229179 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
NUP107-201ENST00000229179 NPM2Q86SE8 214 aaKnown RBP11.84□□□□□ -0.51
NUP107-201ENST00000229179 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
NUP107-201ENST00000229179 ZBTB7CA1YPR0 619 aa11.82□□□□□ -0.52
NUP107-201ENST00000229179 ANP32CO43423 234 aa11.78□□□□□ -0.52
NUP107-201ENST00000229179 CDK11AQ9UQ88 783 aaPredicted RBP11.75□□□□□ -0.53
NUP107-201ENST00000229179 TULP1O00294 542 aaPredicted RBP11.75□□□□□ -0.53
NUP107-201ENST00000229179 SALL2Q9Y467 1007 aaPredicted RBP11.74□□□□□ -0.53
NUP107-201ENST00000229179 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
NUP107-201ENST00000229179 ARXQ96QS3 562 aa11.71□□□□□ -0.53
NUP107-201ENST00000229179 C14orf37Q86TY3 774 aa11.67□□□□□ -0.54
NUP107-201ENST00000229179 ABCC9O60706 1549 aa11.65□□□□□ -0.54
NUP107-201ENST00000229179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.65□□□□□ -0.549e-7■■□□□ 14.4
NUP107-201ENST00000229179 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
NUP107-201ENST00000229179 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
NUP107-201ENST00000229179 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
NUP107-201ENST00000229179 NPM1P06748 294 aaKnown RBP eCLIP11.59□□□□□ -0.55
NUP107-201ENST00000229179 CDK11BP21127 795 aaKnown RBP11.59□□□□□ -0.55
NUP107-201ENST00000229179 ANP32AP39687 249 aaKnown RBP11.59□□□□□ -0.55
NUP107-201ENST00000229179 ANP32BQ92688 251 aaKnown RBP11.59□□□□□ -0.55
NUP107-201ENST00000229179 HAP1P54257 671 aaPredicted RBP11.57□□□□□ -0.56
NUP107-201ENST00000229179 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
NUP107-201ENST00000229179 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
NUP107-201ENST00000229179 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
NUP107-201ENST00000229179 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
NUP107-201ENST00000229179 CHIC2Q9UKJ5 165 aa11.49□□□□□ -0.57
NUP107-201ENST00000229179 UPF2Q9HAU5 1272 aaKnown RBP11.48□□□□□ -0.57
NUP107-201ENST00000229179 SENP3-EIF4A1A0A087X0R7 540 aa11.47□□□□□ -0.57
NUP107-201ENST00000229179 NPHP1O15259 732 aa11.47□□□□□ -0.57
NUP107-201ENST00000229179 ARID4BQ4LE39 1312 aaPredicted RBP11.47□□□□□ -0.57
NUP107-201ENST00000229179 NBR1Q14596 966 aa11.46□□□□□ -0.57
NUP107-201ENST00000229179 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
NUP107-201ENST00000229179 PPP1R15AO75807 674 aaPredicted RBP11.44□□□□□ -0.58
NUP107-201ENST00000229179 FKBP8Q14318 412 aa11.43□□□□□ -0.58
NUP107-201ENST00000229179 HNRNPUQ00839 825 aaKnown RBP eCLIP11.42□□□□□ -0.58
NUP107-201ENST00000229179 WDR43Q15061 677 aaKnown RBP eCLIP11.41□□□□□ -0.58
NUP107-201ENST00000229179 PPM1GO15355 546 aaPredicted RBP11.4□□□□□ -0.59
NUP107-201ENST00000229179 IRX6P78412 446 aaPredicted RBP11.39□□□□□ -0.59
NUP107-201ENST00000229179 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
NUP107-201ENST00000229179 MYH16Q9H6N6 1097 aa11.37□□□□□ -0.59
NUP107-201ENST00000229179 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms