RNA–Protein interactions for RNA: ENST00000565544.1

TAF1C-214, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, humanhuman

TSL 4

Gene TAF1C, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TAF1C-214ENST00000565544 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
TAF1C-214ENST00000565544 CCDC180Q9P1Z9 1646 aa29.24■■■□□ 2.27
TAF1C-214ENST00000565544 ABCC9O60706 1549 aa28.47■■■□□ 2.15
TAF1C-214ENST00000565544 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
TAF1C-214ENST00000565544 NACADO15069 1562 aa27.48■■□□□ 1.99
TAF1C-214ENST00000565544 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.98
TAF1C-214ENST00000565544 ZCCHC6Q5VYS8 1495 aaKnown RBP27.38■■□□□ 1.97
TAF1C-214ENST00000565544 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
TAF1C-214ENST00000565544 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
TAF1C-214ENST00000565544 UNC13AQ9UPW8 1703 aa26.81■■□□□ 1.88
TAF1C-214ENST00000565544 SCRIBQ14160 1630 aa26.6■■□□□ 1.85
TAF1C-214ENST00000565544 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
TAF1C-214ENST00000565544 PABPN1Q86U42 306 aaKnown RBP eCLIP26.59■■□□□ 1.85
TAF1C-214ENST00000565544 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
TAF1C-214ENST00000565544 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
TAF1C-214ENST00000565544 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
TAF1C-214ENST00000565544 CC2D2AQ9P2K1 1620 aa25.78■■□□□ 1.72
TAF1C-214ENST00000565544 CECR2Q9BXF3 1484 aa25.61■■□□□ 1.69
TAF1C-214ENST00000565544 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
TAF1C-214ENST00000565544 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
TAF1C-214ENST00000565544 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
TAF1C-214ENST00000565544 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
TAF1C-214ENST00000565544 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
TAF1C-214ENST00000565544 MROH2BQ7Z745 1585 aa25.28■■□□□ 1.64
TAF1C-214ENST00000565544 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
TAF1C-214ENST00000565544 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
TAF1C-214ENST00000565544 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
TAF1C-214ENST00000565544 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
TAF1C-214ENST00000565544 WIZO95785 1651 aa25.01■■□□□ 1.59
TAF1C-214ENST00000565544 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
TAF1C-214ENST00000565544 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
TAF1C-214ENST00000565544 NESP48681 1621 aa24.63■■□□□ 1.53
TAF1C-214ENST00000565544 CADPSQ9ULU8 1353 aa24.59■■□□□ 1.53
TAF1C-214ENST00000565544 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
TAF1C-214ENST00000565544 PDS5BQ9NTI5 1447 aa24.52■■□□□ 1.52
TAF1C-214ENST00000565544 CCDC88BA6NC98 1476 aa24.49■■□□□ 1.51
TAF1C-214ENST00000565544 CFTRP13569 1480 aa24.45■■□□□ 1.51
TAF1C-214ENST00000565544 SUPT5HO00267 1087 aaKnown RBP24.41■■□□□ 1.5
TAF1C-214ENST00000565544 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
TAF1C-214ENST00000565544 CUX2O14529 1486 aa24.33■■□□□ 1.49
TAF1C-214ENST00000565544 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
TAF1C-214ENST00000565544 THOC2Q8NI27 1593 aaKnown RBP24.29■■□□□ 1.48
TAF1C-214ENST00000565544 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
TAF1C-214ENST00000565544 CEP164Q9UPV0 1460 aa24.27■■□□□ 1.48
TAF1C-214ENST00000565544 MRC2Q9UBG0 1479 aa24.23■■□□□ 1.47
TAF1C-214ENST00000565544 WDR62O43379 1518 aa24.15■■□□□ 1.46
TAF1C-214ENST00000565544 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
TAF1C-214ENST00000565544 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
TAF1C-214ENST00000565544 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
TAF1C-214ENST00000565544 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
TAF1C-214ENST00000565544 IFT140Q96RY7 1462 aa23.78■■□□□ 1.4
TAF1C-214ENST00000565544 CUX1P39880 1505 aa23.73■■□□□ 1.39
TAF1C-214ENST00000565544 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
TAF1C-214ENST00000565544 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
TAF1C-214ENST00000565544 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
TAF1C-214ENST00000565544 SOGA1O94964 1423 aa23.63■■□□□ 1.37
TAF1C-214ENST00000565544 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
TAF1C-214ENST00000565544 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
TAF1C-214ENST00000565544 TOP2BQ02880 1626 aa23.58■■□□□ 1.36
TAF1C-214ENST00000565544 BIVM-ERCC5R4GMW8 1640 aa23.57■■□□□ 1.36
TAF1C-214ENST00000565544 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
TAF1C-214ENST00000565544 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
TAF1C-214ENST00000565544 EIF4G3O43432 1585 aaKnown RBP23.53■■□□□ 1.36
TAF1C-214ENST00000565544 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
TAF1C-214ENST00000565544 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
TAF1C-214ENST00000565544 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.351e-9■■■■□ 26.1
TAF1C-214ENST00000565544 ABCA10Q8WWZ4 1543 aa23.45■■□□□ 1.34
TAF1C-214ENST00000565544 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
TAF1C-214ENST00000565544 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
TAF1C-214ENST00000565544 GAPVD1Q14C86 1478 aa23.36■■□□□ 1.33
TAF1C-214ENST00000565544 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
TAF1C-214ENST00000565544 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
TAF1C-214ENST00000565544 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
TAF1C-214ENST00000565544 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
TAF1C-214ENST00000565544 SNAPC4Q5SXM2 1469 aa23.28■■□□□ 1.32
TAF1C-214ENST00000565544 CHD1O14646 1710 aa23.23■■□□□ 1.31
TAF1C-214ENST00000565544 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
TAF1C-214ENST00000565544 FBLN2P98095 1184 aa23.2■■□□□ 1.3
TAF1C-214ENST00000565544 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
TAF1C-214ENST00000565544 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
TAF1C-214ENST00000565544 KIF27Q86VH2 1401 aa23.16■■□□□ 1.3
TAF1C-214ENST00000565544 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
TAF1C-214ENST00000565544 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
TAF1C-214ENST00000565544 FHAD1B1AJZ9 1412 aa23.1■■□□□ 1.29
TAF1C-214ENST00000565544 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
TAF1C-214ENST00000565544 IGF1RP08069 1367 aa23.02■■□□□ 1.28
TAF1C-214ENST00000565544 CUL7Q14999 1698 aa23■■□□□ 1.27
TAF1C-214ENST00000565544 CLASP1Q7Z460 1538 aa22.99■■□□□ 1.27
TAF1C-214ENST00000565544 NUP160Q12769 1436 aa22.94■■□□□ 1.26
TAF1C-214ENST00000565544 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
TAF1C-214ENST00000565544 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
TAF1C-214ENST00000565544 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
TAF1C-214ENST00000565544 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
TAF1C-214ENST00000565544 CARMIL1Q5VZK9 1371 aa22.89■■□□□ 1.26
TAF1C-214ENST00000565544 CEP170Q5SW79 1584 aa22.89■■□□□ 1.26
TAF1C-214ENST00000565544 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
TAF1C-214ENST00000565544 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
TAF1C-214ENST00000565544 EEA1Q15075 1411 aa22.78■■□□□ 1.24
TAF1C-214ENST00000565544 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
TAF1C-214ENST00000565544 RAPGEF2Q9Y4G8 1499 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 230.5 ms