RNA–Protein interactions for RNA: ENST00000525082.1

DDX6-201, Transcript of DEAD-box helicase 6, humanhuman

TSL 2

Gene DDX6, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6-201ENST00000525082 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
DDX6-201ENST00000525082 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
DDX6-201ENST00000525082 NISCHQ9Y2I1 1504 aa23.71■■□□□ 1.39
DDX6-201ENST00000525082 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
DDX6-201ENST00000525082 PHF23Q9BUL5 403 aaPredicted RBP21.6■■□□□ 1.05
DDX6-201ENST00000525082 CCDC180Q9P1Z9 1646 aa20.95■□□□□ 0.94
DDX6-201ENST00000525082 FOXD1Q16676 465 aa20.45■□□□□ 0.86
DDX6-201ENST00000525082 ABCC9O60706 1549 aa19.93■□□□□ 0.78
DDX6-201ENST00000525082 ZCCHC6Q5VYS8 1495 aaKnown RBP19.91■□□□□ 0.78
DDX6-201ENST00000525082 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
DDX6-201ENST00000525082 MYO15BQ96JP2 1530 aa19.55■□□□□ 0.72
DDX6-201ENST00000525082 NACADO15069 1562 aa19.52■□□□□ 0.71
DDX6-201ENST00000525082 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
DDX6-201ENST00000525082 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
DDX6-201ENST00000525082 MSH5O43196 834 aa19.33■□□□□ 0.68
DDX6-201ENST00000525082 POTEDQ86YR6 584 aa19.33■□□□□ 0.68
DDX6-201ENST00000525082 SCRIBQ14160 1630 aa19.14■□□□□ 0.66
DDX6-201ENST00000525082 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
DDX6-201ENST00000525082 PIAS4Q8N2W9 510 aaPredicted RBP19.11■□□□□ 0.65
DDX6-201ENST00000525082 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
DDX6-201ENST00000525082 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
DDX6-201ENST00000525082 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
DDX6-201ENST00000525082 ADRA2BP18089 450 aa18.82■□□□□ 0.6
DDX6-201ENST00000525082 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
DDX6-201ENST00000525082 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
DDX6-201ENST00000525082 BAZ1AQ9NRL2 1556 aaPredicted RBP18.38■□□□□ 0.53
DDX6-201ENST00000525082 CECR2Q9BXF3 1484 aa18.38■□□□□ 0.53
DDX6-201ENST00000525082 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
DDX6-201ENST00000525082 EIF4G1Q04637 1599 aaKnown RBP18.28■□□□□ 0.52
DDX6-201ENST00000525082 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
DDX6-201ENST00000525082 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
DDX6-201ENST00000525082 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
DDX6-201ENST00000525082 WIZO95785 1651 aa18.13■□□□□ 0.49
DDX6-201ENST00000525082 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
DDX6-201ENST00000525082 SMARCA2P51531 1590 aa18.11■□□□□ 0.49
DDX6-201ENST00000525082 CC2D2AQ9P2K1 1620 aa18.07■□□□□ 0.48
DDX6-201ENST00000525082 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
DDX6-201ENST00000525082 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
DDX6-201ENST00000525082 HMGXB3Q12766 1538 aa17.99■□□□□ 0.47
DDX6-201ENST00000525082 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
DDX6-201ENST00000525082 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
DDX6-201ENST00000525082 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
DDX6-201ENST00000525082 DNAJC5BQ9UF47 199 aa17.68■□□□□ 0.42
DDX6-201ENST00000525082 PRDM2Q13029 1718 aa17.5■□□□□ 0.39
DDX6-201ENST00000525082 CFTRP13569 1480 aa17.48■□□□□ 0.39
DDX6-201ENST00000525082 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
DDX6-201ENST00000525082 CADPSQ9ULU8 1353 aa17.44■□□□□ 0.38
DDX6-201ENST00000525082 NESP48681 1621 aa17.38■□□□□ 0.37
DDX6-201ENST00000525082 MAPK8IP2Q13387 824 aaPredicted RBP17.36■□□□□ 0.37
DDX6-201ENST00000525082 DMRT2Q9Y5R5 561 aa17.33■□□□□ 0.36
DDX6-201ENST00000525082 SCAF1Q9H7N4 1312 aaKnown RBP17.31■□□□□ 0.36
DDX6-201ENST00000525082 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
DDX6-201ENST00000525082 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
DDX6-201ENST00000525082 ABCC8Q09428 1581 aa17.27■□□□□ 0.35
DDX6-201ENST00000525082 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
DDX6-201ENST00000525082 KIF21AQ7Z4S6 1674 aa17.26■□□□□ 0.35
DDX6-201ENST00000525082 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
DDX6-201ENST00000525082 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
DDX6-201ENST00000525082 SYNJ1O43426 1573 aa17.17■□□□□ 0.34
DDX6-201ENST00000525082 BIVM-ERCC5R4GMW8 1640 aa17.16■□□□□ 0.34
DDX6-201ENST00000525082 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
DDX6-201ENST00000525082 CUX1P39880 1505 aa17.14■□□□□ 0.33
DDX6-201ENST00000525082 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
DDX6-201ENST00000525082 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
DDX6-201ENST00000525082 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
DDX6-201ENST00000525082 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
DDX6-201ENST00000525082 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.32
DDX6-201ENST00000525082 TOPBP1Q92547 1522 aa17.08■□□□□ 0.32
DDX6-201ENST00000525082 WDR62O43379 1518 aa17.06■□□□□ 0.32
DDX6-201ENST00000525082 FGD5Q6ZNL6 1462 aa17.01■□□□□ 0.31
DDX6-201ENST00000525082 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
DDX6-201ENST00000525082 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
DDX6-201ENST00000525082 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
DDX6-201ENST00000525082 SOGA1O94964 1423 aa16.86■□□□□ 0.29
DDX6-201ENST00000525082 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
DDX6-201ENST00000525082 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
DDX6-201ENST00000525082 EEA1Q15075 1411 aa16.85■□□□□ 0.29
DDX6-201ENST00000525082 CUX2O14529 1486 aa16.85■□□□□ 0.29
DDX6-201ENST00000525082 IFT140Q96RY7 1462 aa16.85■□□□□ 0.29
DDX6-201ENST00000525082 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
DDX6-201ENST00000525082 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
DDX6-201ENST00000525082 ABCA5Q8WWZ7 1642 aa16.8■□□□□ 0.28
DDX6-201ENST00000525082 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
DDX6-201ENST00000525082 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
DDX6-201ENST00000525082 EIF4G3O43432 1585 aaKnown RBP16.75■□□□□ 0.27
DDX6-201ENST00000525082 PBRM1Q86U86 1689 aa16.72■□□□□ 0.27
DDX6-201ENST00000525082 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
DDX6-201ENST00000525082 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
DDX6-201ENST00000525082 PPP4R3CPQ6ZMV5 832 aa16.7■□□□□ 0.26
DDX6-201ENST00000525082 ZNF608Q9ULD9 1512 aaPredicted RBP16.7■□□□□ 0.26
DDX6-201ENST00000525082 TDRD9Q8NDG6 1382 aaKnown RBP16.69■□□□□ 0.26
DDX6-201ENST00000525082 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
DDX6-201ENST00000525082 CUL7Q14999 1698 aa16.68■□□□□ 0.26
DDX6-201ENST00000525082 KIF21BO75037 1637 aa16.67■□□□□ 0.26
DDX6-201ENST00000525082 AQRO60306 1485 aaKnown RBP eCLIP16.65■□□□□ 0.264e-7■■■■□ 24.9
DDX6-201ENST00000525082 GRIN2BQ13224 1484 aa16.65■□□□□ 0.26
DDX6-201ENST00000525082 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
DDX6-201ENST00000525082 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
DDX6-201ENST00000525082 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
DDX6-201ENST00000525082 IGF1RP08069 1367 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms