RNA–Protein interactions for RNA: ENST00000479105.6

RFC2-206, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 957 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-206ENST00000479105 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
RFC2-206ENST00000479105 CHIC1Q5VXU3 224 aa26.31■■□□□ 1.8
RFC2-206ENST00000479105 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
RFC2-206ENST00000479105 SENP3Q9H4L4 574 aaPredicted RBP23.02■■□□□ 1.28
RFC2-206ENST00000479105 FOXD1Q16676 465 aa21.37■■□□□ 1.01
RFC2-206ENST00000479105 PLPPR3Q6T4P5 718 aa21.31■■□□□ 1
RFC2-206ENST00000479105 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
RFC2-206ENST00000479105 ADRA2BP18089 450 aa20.41■□□□□ 0.86
RFC2-206ENST00000479105 NISCHQ9Y2I1 1504 aa20.17■□□□□ 0.82
RFC2-206ENST00000479105 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
RFC2-206ENST00000479105 MSH5O43196 834 aa19.79■□□□□ 0.76
RFC2-206ENST00000479105 PPP4R3CPQ6ZMV5 832 aa18.75■□□□□ 0.59
RFC2-206ENST00000479105 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
RFC2-206ENST00000479105 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
RFC2-206ENST00000479105 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
RFC2-206ENST00000479105 CNKSR2Q8WXI2 1034 aa18.28■□□□□ 0.52
RFC2-206ENST00000479105 POTEDQ86YR6 584 aa18.26■□□□□ 0.51
RFC2-206ENST00000479105 NCBP3Q53F19 620 aaKnown RBP18.24■□□□□ 0.51
RFC2-206ENST00000479105 KCNA4P22459 653 aa18.13■□□□□ 0.49
RFC2-206ENST00000479105 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
RFC2-206ENST00000479105 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
RFC2-206ENST00000479105 HOXD11P31277 338 aaPredicted RBP17.92■□□□□ 0.46
RFC2-206ENST00000479105 CCDC180Q9P1Z9 1646 aa17.69■□□□□ 0.42
RFC2-206ENST00000479105 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
RFC2-206ENST00000479105 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
RFC2-206ENST00000479105 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
RFC2-206ENST00000479105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
RFC2-206ENST00000479105 SLC4A2P04920 1241 aa16.98■□□□□ 0.31
RFC2-206ENST00000479105 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
RFC2-206ENST00000479105 RNF39Q9H2S5 420 aa16.93■□□□□ 0.3
RFC2-206ENST00000479105 U3KPZ7 1027 aaPredicted RBP16.77■□□□□ 0.28
RFC2-206ENST00000479105 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
RFC2-206ENST00000479105 FOXD4L1Q9NU39 408 aa16.75■□□□□ 0.27
RFC2-206ENST00000479105 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
RFC2-206ENST00000479105 ZBTB22O15209 634 aa16.67■□□□□ 0.26
RFC2-206ENST00000479105 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
RFC2-206ENST00000479105 CACNB1Q02641 598 aaPredicted RBP16.6■□□□□ 0.25
RFC2-206ENST00000479105 MYO15BQ96JP2 1530 aa16.56■□□□□ 0.24
RFC2-206ENST00000479105 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
RFC2-206ENST00000479105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.53■□□□□ 0.24
RFC2-206ENST00000479105 HNRNPUL2Q1KMD3 747 aaKnown RBP16.53■□□□□ 0.24
RFC2-206ENST00000479105 ABCC9O60706 1549 aa16.52■□□□□ 0.24
RFC2-206ENST00000479105 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
RFC2-206ENST00000479105 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
RFC2-206ENST00000479105 SAMD1Q6SPF0 538 aaPredicted RBP16.45■□□□□ 0.22
RFC2-206ENST00000479105 NACADO15069 1562 aa16.41■□□□□ 0.22
RFC2-206ENST00000479105 APLP2Q06481 763 aa16.4■□□□□ 0.22
RFC2-206ENST00000479105 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
RFC2-206ENST00000479105 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
RFC2-206ENST00000479105 CAPN15O75808 1086 aa16.29■□□□□ 0.2
RFC2-206ENST00000479105 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
RFC2-206ENST00000479105 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
RFC2-206ENST00000479105 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
RFC2-206ENST00000479105 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
RFC2-206ENST00000479105 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
RFC2-206ENST00000479105 ATF5Q9Y2D1 282 aaPredicted RBP16.14■□□□□ 0.17
RFC2-206ENST00000479105 DSG3P32926 999 aa16.06■□□□□ 0.16
RFC2-206ENST00000479105 ABCB7O75027 752 aa15.96■□□□□ 0.15
RFC2-206ENST00000479105 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
RFC2-206ENST00000479105 POLA2Q14181 598 aa15.89■□□□□ 0.13
RFC2-206ENST00000479105 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
RFC2-206ENST00000479105 SUPT5HO00267 1087 aaKnown RBP15.72■□□□□ 0.11
RFC2-206ENST00000479105 RSF1Q96T23 1441 aaPredicted RBP15.62■□□□□ 0.09
RFC2-206ENST00000479105 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
RFC2-206ENST00000479105 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
RFC2-206ENST00000479105 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
RFC2-206ENST00000479105 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
RFC2-206ENST00000479105 SMARCA4P51532 1647 aa15.53■□□□□ 0.08
RFC2-206ENST00000479105 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
RFC2-206ENST00000479105 FBLN2P98095 1184 aa15.5■□□□□ 0.07
RFC2-206ENST00000479105 WIZO95785 1651 aa15.44■□□□□ 0.06
RFC2-206ENST00000479105 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
RFC2-206ENST00000479105 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
RFC2-206ENST00000479105 TOP2AP11388 1531 aaKnown RBP15.33■□□□□ 0.05
RFC2-206ENST00000479105 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
RFC2-206ENST00000479105 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
RFC2-206ENST00000479105 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
RFC2-206ENST00000479105 EIF4G1Q04637 1599 aaKnown RBP15.25■□□□□ 0.03
RFC2-206ENST00000479105 ATAD2BQ9ULI0 1458 aa15.22■□□□□ 0.03
RFC2-206ENST00000479105 SPDYE2BA6NHP3 402 aa15.19■□□□□ 0.02
RFC2-206ENST00000479105 SPDYE6P0CI01 402 aa15.19■□□□□ 0.02
RFC2-206ENST00000479105 SPDYE2Q495Y8 402 aa15.19■□□□□ 0.02
RFC2-206ENST00000479105 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
RFC2-206ENST00000479105 HMGXB3Q12766 1538 aa15.14■□□□□ 0.01
RFC2-206ENST00000479105 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
RFC2-206ENST00000479105 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
RFC2-206ENST00000479105 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
RFC2-206ENST00000479105 ZNF692Q9BU19 519 aaPredicted RBP15.1■□□□□ 0.01
RFC2-206ENST00000479105 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
RFC2-206ENST00000479105 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
RFC2-206ENST00000479105 CC2D2AQ9P2K1 1620 aa15.01□□□□□ -0.01
RFC2-206ENST00000479105 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
RFC2-206ENST00000479105 FKBP8Q14318 412 aa14.89□□□□□ -0.03
RFC2-206ENST00000479105 TRIM41Q8WV44 630 aa14.82□□□□□ -0.04
RFC2-206ENST00000479105 PRDM2Q13029 1718 aa14.82□□□□□ -0.04
RFC2-206ENST00000479105 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
RFC2-206ENST00000479105 CFTRP13569 1480 aa14.77□□□□□ -0.04
RFC2-206ENST00000479105 PITPNM1O00562 1244 aa14.77□□□□□ -0.05
RFC2-206ENST00000479105 PROM2Q8N271 834 aa14.77□□□□□ -0.05
RFC2-206ENST00000479105 SPDYE1Q8NFV5 336 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms