RNA–Protein interactions for RNA: ENST00000470266.5

RFC2-204, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-204ENST00000470266 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
RFC2-204ENST00000470266 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
RFC2-204ENST00000470266 ABCC9O60706 1549 aa22.34■■□□□ 1.17
RFC2-204ENST00000470266 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
RFC2-204ENST00000470266 DCAF8L2P0C7V8 631 aa21.37■■□□□ 1.01
RFC2-204ENST00000470266 NACADO15069 1562 aa21.33■■□□□ 1.01
RFC2-204ENST00000470266 ZCCHC6Q5VYS8 1495 aaKnown RBP21.19■□□□□ 0.98
RFC2-204ENST00000470266 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
RFC2-204ENST00000470266 DCAF1Q9Y4B6 1507 aa21.04■□□□□ 0.96
RFC2-204ENST00000470266 PABPN1Q86U42 306 aaKnown RBP eCLIP20.9■□□□□ 0.94
RFC2-204ENST00000470266 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
RFC2-204ENST00000470266 BICRAQ9NZM4 1560 aa20.76■□□□□ 0.91
RFC2-204ENST00000470266 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
RFC2-204ENST00000470266 DNAJC5BQ9UF47 199 aa20.66■□□□□ 0.9
RFC2-204ENST00000470266 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
RFC2-204ENST00000470266 EIF4G1Q04637 1599 aaKnown RBP20.23■□□□□ 0.83
RFC2-204ENST00000470266 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
RFC2-204ENST00000470266 CECR2Q9BXF3 1484 aa20.09■□□□□ 0.81
RFC2-204ENST00000470266 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
RFC2-204ENST00000470266 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
RFC2-204ENST00000470266 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
RFC2-204ENST00000470266 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
RFC2-204ENST00000470266 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
RFC2-204ENST00000470266 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
RFC2-204ENST00000470266 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
RFC2-204ENST00000470266 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
RFC2-204ENST00000470266 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
RFC2-204ENST00000470266 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
RFC2-204ENST00000470266 WIZO95785 1651 aa19.37■□□□□ 0.69
RFC2-204ENST00000470266 NESP48681 1621 aa19.3■□□□□ 0.68
RFC2-204ENST00000470266 ERCC6Q03468 1493 aa19.26■□□□□ 0.67
RFC2-204ENST00000470266 TOP2AP11388 1531 aaKnown RBP19.18■□□□□ 0.66
RFC2-204ENST00000470266 LAMC3Q9Y6N6 1575 aa19.18■□□□□ 0.66
RFC2-204ENST00000470266 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
RFC2-204ENST00000470266 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
RFC2-204ENST00000470266 CUX2O14529 1486 aa19.08■□□□□ 0.64
RFC2-204ENST00000470266 CFTRP13569 1480 aa19.01■□□□□ 0.63
RFC2-204ENST00000470266 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
RFC2-204ENST00000470266 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
RFC2-204ENST00000470266 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
RFC2-204ENST00000470266 FANCD2Q9BXW9 1451 aa18.92■□□□□ 0.62
RFC2-204ENST00000470266 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
RFC2-204ENST00000470266 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
RFC2-204ENST00000470266 WDR62O43379 1518 aa18.84■□□□□ 0.61
RFC2-204ENST00000470266 SUPT5HO00267 1087 aaKnown RBP18.81■□□□□ 0.6
RFC2-204ENST00000470266 URB2Q14146 1524 aaKnown RBP18.74■□□□□ 0.59
RFC2-204ENST00000470266 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
RFC2-204ENST00000470266 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
RFC2-204ENST00000470266 TOPBP1Q92547 1522 aa18.6■□□□□ 0.57
RFC2-204ENST00000470266 ABCC8Q09428 1581 aa18.55■□□□□ 0.56
RFC2-204ENST00000470266 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
RFC2-204ENST00000470266 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
RFC2-204ENST00000470266 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
RFC2-204ENST00000470266 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
RFC2-204ENST00000470266 CUX1P39880 1505 aa18.42■□□□□ 0.54
RFC2-204ENST00000470266 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
RFC2-204ENST00000470266 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
RFC2-204ENST00000470266 TARBP1Q13395 1621 aaKnown RBP18.38■□□□□ 0.53
RFC2-204ENST00000470266 SOGA1O94964 1423 aa18.37■□□□□ 0.53
RFC2-204ENST00000470266 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■■□□ 18.3
RFC2-204ENST00000470266 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
RFC2-204ENST00000470266 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
RFC2-204ENST00000470266 OSCARQ8IYS5 282 aa18.29■□□□□ 0.52
RFC2-204ENST00000470266 WRNQ14191 1432 aaPredicted RBP eCLIP18.26■□□□□ 0.51
RFC2-204ENST00000470266 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
RFC2-204ENST00000470266 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
RFC2-204ENST00000470266 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
RFC2-204ENST00000470266 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
RFC2-204ENST00000470266 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
RFC2-204ENST00000470266 GRIN2BQ13224 1484 aa18.16■□□□□ 0.5
RFC2-204ENST00000470266 SNAPC4Q5SXM2 1469 aa18.16■□□□□ 0.5
RFC2-204ENST00000470266 FBLN2P98095 1184 aa18.16■□□□□ 0.5
RFC2-204ENST00000470266 GAPVD1Q14C86 1478 aa18.14■□□□□ 0.5
RFC2-204ENST00000470266 MAGI1Q96QZ7 1491 aaPredicted RBP18.11■□□□□ 0.49
RFC2-204ENST00000470266 ABCA5Q8WWZ7 1642 aa18.1■□□□□ 0.49
RFC2-204ENST00000470266 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
RFC2-204ENST00000470266 CHD1O14646 1710 aa18.07■□□□□ 0.48
RFC2-204ENST00000470266 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
RFC2-204ENST00000470266 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
RFC2-204ENST00000470266 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
RFC2-204ENST00000470266 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
RFC2-204ENST00000470266 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
RFC2-204ENST00000470266 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
RFC2-204ENST00000470266 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
RFC2-204ENST00000470266 ERICH3Q5RHP9 1530 aa17.95■□□□□ 0.46
RFC2-204ENST00000470266 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
RFC2-204ENST00000470266 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
RFC2-204ENST00000470266 FHAD1B1AJZ9 1412 aa17.93■□□□□ 0.46
RFC2-204ENST00000470266 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
RFC2-204ENST00000470266 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
RFC2-204ENST00000470266 CYB5RLQ6IPT4 315 aa17.86■□□□□ 0.45
RFC2-204ENST00000470266 NUP160Q12769 1436 aa17.86■□□□□ 0.45
RFC2-204ENST00000470266 IGF1RP08069 1367 aa17.85■□□□□ 0.45
RFC2-204ENST00000470266 ARAP1Q96P48 1450 aa17.84■□□□□ 0.45
RFC2-204ENST00000470266 CEP170Q5SW79 1584 aa17.83■□□□□ 0.44
RFC2-204ENST00000470266 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
RFC2-204ENST00000470266 CUL7Q14999 1698 aa17.73■□□□□ 0.43
RFC2-204ENST00000470266 ERCC6L2Q5T890 1561 aa17.71■□□□□ 0.43
RFC2-204ENST00000470266 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
RFC2-204ENST00000470266 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms