RNA–Protein interactions for RNA: ENST00000494019.5

RFC2-211, Transcript of replication factor C subunit 2, humanhuman

TSL 3

Gene RFC2, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-211ENST00000494019 NISCHQ9Y2I1 1504 aa24.42■■□□□ 1.5
RFC2-211ENST00000494019 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
RFC2-211ENST00000494019 ABCC9O60706 1549 aa21.07■□□□□ 0.96
RFC2-211ENST00000494019 ZCCHC6Q5VYS8 1495 aaKnown RBP20.4■□□□□ 0.86
RFC2-211ENST00000494019 RB1CC1Q8TDY2 1594 aa20.37■□□□□ 0.85
RFC2-211ENST00000494019 NACADO15069 1562 aa20.34■□□□□ 0.85
RFC2-211ENST00000494019 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
RFC2-211ENST00000494019 MYO15BQ96JP2 1530 aa20.23■□□□□ 0.83
RFC2-211ENST00000494019 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
RFC2-211ENST00000494019 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
RFC2-211ENST00000494019 SCRIBQ14160 1630 aa19.86■□□□□ 0.77
RFC2-211ENST00000494019 BICRAQ9NZM4 1560 aa19.73■□□□□ 0.75
RFC2-211ENST00000494019 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
RFC2-211ENST00000494019 SHROOM4Q9ULL8 1493 aa19.52■□□□□ 0.72
RFC2-211ENST00000494019 EIF4G1Q04637 1599 aaKnown RBP19.21■□□□□ 0.67
RFC2-211ENST00000494019 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
RFC2-211ENST00000494019 DNAJC5BQ9UF47 199 aa19.09■□□□□ 0.65
RFC2-211ENST00000494019 CECR2Q9BXF3 1484 aa18.99■□□□□ 0.63
RFC2-211ENST00000494019 SMARCA4P51532 1647 aa18.99■□□□□ 0.63
RFC2-211ENST00000494019 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
RFC2-211ENST00000494019 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
RFC2-211ENST00000494019 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
RFC2-211ENST00000494019 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.59
RFC2-211ENST00000494019 PEG3Q9GZU2 1588 aa18.76■□□□□ 0.59
RFC2-211ENST00000494019 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
RFC2-211ENST00000494019 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
RFC2-211ENST00000494019 WIZO95785 1651 aa18.7■□□□□ 0.58
RFC2-211ENST00000494019 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
RFC2-211ENST00000494019 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
RFC2-211ENST00000494019 TOP2AP11388 1531 aaKnown RBP18.49■□□□□ 0.55
RFC2-211ENST00000494019 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
RFC2-211ENST00000494019 NESP48681 1621 aa18.27■□□□□ 0.52
RFC2-211ENST00000494019 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
RFC2-211ENST00000494019 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
RFC2-211ENST00000494019 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
RFC2-211ENST00000494019 KIF21AQ7Z4S6 1674 aa18.18■□□□□ 0.5
RFC2-211ENST00000494019 CADPSQ9ULU8 1353 aa18.16■□□□□ 0.5
RFC2-211ENST00000494019 ERCC6Q03468 1493 aa18.15■□□□□ 0.5
RFC2-211ENST00000494019 CFTRP13569 1480 aa18.11■□□□□ 0.49
RFC2-211ENST00000494019 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
RFC2-211ENST00000494019 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
RFC2-211ENST00000494019 FANCD2Q9BXW9 1451 aa18.01■□□□□ 0.47
RFC2-211ENST00000494019 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
RFC2-211ENST00000494019 MRC2Q9UBG0 1479 aa17.93■□□□□ 0.46
RFC2-211ENST00000494019 CUX2O14529 1486 aa17.9■□□□□ 0.46
RFC2-211ENST00000494019 WDR62O43379 1518 aa17.89■□□□□ 0.45
RFC2-211ENST00000494019 URB2Q14146 1524 aaKnown RBP17.82■□□□□ 0.44
RFC2-211ENST00000494019 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.44
RFC2-211ENST00000494019 TOPBP1Q92547 1522 aa17.75■□□□□ 0.43
RFC2-211ENST00000494019 ABCC8Q09428 1581 aa17.73■□□□□ 0.43
RFC2-211ENST00000494019 CUX1P39880 1505 aa17.67■□□□□ 0.42
RFC2-211ENST00000494019 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
RFC2-211ENST00000494019 POLA1P09884 1462 aaPredicted RBP17.6■□□□□ 0.41
RFC2-211ENST00000494019 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
RFC2-211ENST00000494019 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
RFC2-211ENST00000494019 TOP2BQ02880 1626 aa17.58■□□□□ 0.41
RFC2-211ENST00000494019 IFT140Q96RY7 1462 aa17.58■□□□□ 0.41
RFC2-211ENST00000494019 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
RFC2-211ENST00000494019 TARBP1Q13395 1621 aaKnown RBP17.58■□□□□ 0.4
RFC2-211ENST00000494019 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
RFC2-211ENST00000494019 EIF4G3O43432 1585 aaKnown RBP17.53■□□□□ 0.4
RFC2-211ENST00000494019 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
RFC2-211ENST00000494019 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
RFC2-211ENST00000494019 SOGA1O94964 1423 aa17.48■□□□□ 0.39
RFC2-211ENST00000494019 PBRM1Q86U86 1689 aa17.43■□□□□ 0.38
RFC2-211ENST00000494019 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
RFC2-211ENST00000494019 ABCA5Q8WWZ7 1642 aa17.4■□□□□ 0.38
RFC2-211ENST00000494019 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.371e-6■■■□□ 18.3
RFC2-211ENST00000494019 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
RFC2-211ENST00000494019 CHD1O14646 1710 aa17.33■□□□□ 0.37
RFC2-211ENST00000494019 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
RFC2-211ENST00000494019 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
RFC2-211ENST00000494019 SNAPC4Q5SXM2 1469 aa17.28■□□□□ 0.36
RFC2-211ENST00000494019 MAGI1Q96QZ7 1491 aaPredicted RBP17.25■□□□□ 0.35
RFC2-211ENST00000494019 ADAMTS12P58397 1594 aa17.23■□□□□ 0.35
RFC2-211ENST00000494019 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
RFC2-211ENST00000494019 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
RFC2-211ENST00000494019 KIF27Q86VH2 1401 aa17.19■□□□□ 0.34
RFC2-211ENST00000494019 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
RFC2-211ENST00000494019 CUL7Q14999 1698 aa17.16■□□□□ 0.34
RFC2-211ENST00000494019 FBLN2P98095 1184 aa17.13■□□□□ 0.33
RFC2-211ENST00000494019 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
RFC2-211ENST00000494019 GRIN2AQ12879 1464 aa17.1■□□□□ 0.33
RFC2-211ENST00000494019 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
RFC2-211ENST00000494019 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
RFC2-211ENST00000494019 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
RFC2-211ENST00000494019 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
RFC2-211ENST00000494019 CHIC1Q5VXU3 224 aa17.06■□□□□ 0.32
RFC2-211ENST00000494019 CLASP1Q7Z460 1538 aa17.05■□□□□ 0.32
RFC2-211ENST00000494019 IGF1RP08069 1367 aa17.04■□□□□ 0.32
RFC2-211ENST00000494019 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
RFC2-211ENST00000494019 NUP160Q12769 1436 aa16.98■□□□□ 0.31
RFC2-211ENST00000494019 CARMIL1Q5VZK9 1371 aa16.97■□□□□ 0.31
RFC2-211ENST00000494019 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
RFC2-211ENST00000494019 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
RFC2-211ENST00000494019 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
RFC2-211ENST00000494019 EEA1Q15075 1411 aa16.95■□□□□ 0.3
RFC2-211ENST00000494019 CTTNBP2Q8WZ74 1663 aa16.94■□□□□ 0.3
RFC2-211ENST00000494019 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
RFC2-211ENST00000494019 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms