Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.49□□□□□ -0.09
XRCC2O43543 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
XRCC2O43543 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
XRCC2O43543 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
XRCC2O43543 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.49□□□□□ -0.09
XRCC2O43543 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 TSPY26P-202ENST00000565928 3884 ntBASIC14.49□□□□□ -0.09
XRCC2O43543 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
XRCC2O43543 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
XRCC2O43543 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.48□□□□□ -0.09
XRCC2O43543 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
XRCC2O43543 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
XRCC2O43543 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.48□□□□□ -0.09
XRCC2O43543 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 PMS2P1-201ENST00000431037 1228 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 TPM4P1-201ENST00000436100 807 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 PRSS29P-201ENST00000440800 595 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.48□□□□□ -0.09
XRCC2O43543 AL662844.1-201ENST00000546340 181 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
XRCC2O43543 AC104692.2-201ENST00000603054 253 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 AC117500.6-201ENST00000624871 588 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
XRCC2O43543 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 SLC22A20-204ENST00000530038 1673 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.48□□□□□ -0.09
XRCC2O43543 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 PCDHA1-201ENST00000378133 2726 ntBASIC14.48□□□□□ -0.09
XRCC2O43543 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.48□□□□□ -0.09
XRCC2O43543 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
XRCC2O43543 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
XRCC2O43543 SNX33P1-201ENST00000592116 1762 ntBASIC14.47□□□□□ -0.09
XRCC2O43543 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.47□□□□□ -0.09
XRCC2O43543 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
XRCC2O43543 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
XRCC2O43543 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.47□□□□□ -0.09
XRCC2O43543 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.47□□□□□ -0.09
XRCC2O43543 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.47□□□□□ -0.09
XRCC2O43543 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.47□□□□□ -0.09
XRCC2O43543 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
XRCC2O43543 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.47□□□□□ -0.09
XRCC2O43543 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.47□□□□□ -0.09
XRCC2O43543 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.47□□□□□ -0.09
XRCC2O43543 AC004790.2-201ENST00000623588 572 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms