Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 FER1L4-210ENST00000615531 5998 ntBASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 AL009178.2-201ENST00000597278 2719 ntBASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TCRBV3S1A0A5B6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AC117947.1-201ENST00000427448 529 ntBASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TCRBV3S1A0A5B6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 AC091607.1-201ENST00000490318 1060 ntBASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 IGHV3-41-201ENST00000613121 348 ntBASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TCRBV3S1A0A5B6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms