Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 PMPCAP1-201ENST00000508114 1576 ntBASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDHB16Q9NRJ7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 AC078925.2-201ENST00000624013 1973 ntBASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 AC069148.1-201ENST00000608741 768 ntBASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDHB16Q9NRJ7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 KRT17P6-201ENST00000453795 1220 ntBASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDHB16Q9NRJ7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 PAUPAR-201ENST00000630360 2965 ntBASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDHB16Q9NRJ7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms