Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.24■□□□□ 0.19
PRPF18Q99633 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.24■□□□□ 0.19
PRPF18Q99633 MIR5100-201ENST00000579544 119 ntBASIC16.24■□□□□ 0.19
PRPF18Q99633 AC099336.1-202ENST00000602961 463 ntBASIC16.24■□□□□ 0.19
PRPF18Q99633 AC091076.1-201ENST00000610741 619 ntBASIC16.24■□□□□ 0.19
PRPF18Q99633 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PRPF18Q99633 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRPF18Q99633 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.24■□□□□ 0.19
PRPF18Q99633 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRPF18Q99633 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PRPF18Q99633 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PRPF18Q99633 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PRPF18Q99633 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.23■□□□□ 0.19
PRPF18Q99633 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.23■□□□□ 0.19
PRPF18Q99633 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 KRT16P4-201ENST00000453883 522 ntBASIC16.23■□□□□ 0.19
PRPF18Q99633 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.23■□□□□ 0.19
PRPF18Q99633 MIR3180-1-201ENST00000580374 94 ntBASIC16.23■□□□□ 0.19
PRPF18Q99633 MIR3180-3-201ENST00000584616 94 ntBASIC16.23■□□□□ 0.19
PRPF18Q99633 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.23■□□□□ 0.19
PRPF18Q99633 AL591684.3-201ENST00000605187 298 ntBASIC16.23■□□□□ 0.19
PRPF18Q99633 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.23■□□□□ 0.19
PRPF18Q99633 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PRPF18Q99633 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.23■□□□□ 0.19
PRPF18Q99633 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PRPF18Q99633 AC148477.5-201ENST00000625164 1645 ntBASIC16.23■□□□□ 0.19
PRPF18Q99633 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.22■□□□□ 0.19
PRPF18Q99633 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PRPF18Q99633 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRPF18Q99633 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms