Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC85AQ96PX6 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 LINC02560-201ENST00000596379 459 ntBASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC85AQ96PX6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AP001094.4-201ENST00000579008 2176 ntBASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AL603756.1-201ENST00000606511 2163 ntBASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AC100757.3-201ENST00000622361 1406 ntBASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AL138828.2-201ENST00000615812 383 ntBASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 SPTSSB-204ENST00000617024 1292 ntBASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AC073592.8-201ENST00000624126 511 ntBASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC85AQ96PX6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC85AQ96PX6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms