Protein–RNA interactions for Protein: Q6ZMY6

WDR88, WD repeat-containing protein 88, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR88Q6ZMY6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
WDR88Q6ZMY6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AC079781.3-201ENST00000449110 356 ntBASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AC105339.3-201ENST00000560043 636 ntBASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 GPAA1P2-202ENST00000606848 1787 ntBASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 AL596087.1-201ENST00000400979 1969 ntBASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
WDR88Q6ZMY6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 KRT126P-201ENST00000549467 1181 ntBASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AC087641.1-201ENST00000557561 1021 ntBASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AC005412.3-201ENST00000580309 715 ntBASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 AL139384.1-201ENST00000612143 3047 ntBASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
WDR88Q6ZMY6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms