Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
TMEM258P61165 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC9.79□□□□□ -0.84
TMEM258P61165 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 RAP2CP1-202ENST00000605179 643 ntBASIC9.79□□□□□ -0.84
TMEM258P61165 TKT-201ENST00000296289 1931 ntTSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 AC092135.3-201ENST00000624151 1846 ntBASIC9.79□□□□□ -0.84
TMEM258P61165 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 ME2P1-201ENST00000426028 1970 ntBASIC9.79□□□□□ -0.84
TMEM258P61165 USP28-214ENST00000545540 3431 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC9.79□□□□□ -0.84
TMEM258P61165 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC9.79□□□□□ -0.84
TMEM258P61165 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TMEM258P61165 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC9.78□□□□□ -0.84
TMEM258P61165 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC9.78□□□□□ -0.84
TMEM258P61165 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC9.78□□□□□ -0.84
TMEM258P61165 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 PTPA-214ENST00000423100 988 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.78□□□□□ -0.84
TMEM258P61165 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 BNIP3P1-202ENST00000550043 1585 ntBASIC9.78□□□□□ -0.84
TMEM258P61165 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 EML1-203ENST00000334192 4064 ntTSL 5 BASIC9.78□□□□□ -0.84
TMEM258P61165 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC9.78□□□□□ -0.84
TMEM258P61165 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
TMEM258P61165 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TMEM258P61165 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC9.78□□□□□ -0.84
TMEM258P61165 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms