Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.13■□□□□ 0.17
LBPP18428 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LBPP18428 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LBPP18428 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LBPP18428 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
LBPP18428 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.12■□□□□ 0.17
LBPP18428 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.12■□□□□ 0.17
LBPP18428 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 PAWRP1-201ENST00000451083 565 ntBASIC16.12■□□□□ 0.17
LBPP18428 KRT16P4-201ENST00000453883 522 ntBASIC16.12■□□□□ 0.17
LBPP18428 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.12■□□□□ 0.17
LBPP18428 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.12■□□□□ 0.17
LBPP18428 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.12■□□□□ 0.17
LBPP18428 AC087388.1-201ENST00000571370 1112 ntBASIC16.12■□□□□ 0.17
LBPP18428 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.12■□□□□ 0.17
LBPP18428 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LBPP18428 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.12■□□□□ 0.17
LBPP18428 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.12■□□□□ 0.17
LBPP18428 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.12■□□□□ 0.17
LBPP18428 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LBPP18428 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LBPP18428 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.11■□□□□ 0.17
LBPP18428 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 AC132008.2-207ENST00000454517 770 ntBASIC16.11■□□□□ 0.17
LBPP18428 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 KRT18P21-201ENST00000515767 1272 ntBASIC16.11■□□□□ 0.17
LBPP18428 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 NPAP1P7-201ENST00000613027 823 ntBASIC16.11■□□□□ 0.17
LBPP18428 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LBPP18428 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LBPP18428 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
LBPP18428 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LBPP18428 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.1■□□□□ 0.17
LBPP18428 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.1■□□□□ 0.17
LBPP18428 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.1■□□□□ 0.17
LBPP18428 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
LBPP18428 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LBPP18428 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.1■□□□□ 0.17
LBPP18428 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.1■□□□□ 0.17
LBPP18428 NKAPP1-205ENST00000585790 367 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms