Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM3P06753 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM3P06753 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 AC132938.5-201ENST00000624980 1813 ntBASIC18.73■□□□□ 0.59
TPM3P06753 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 TSPY22P-201ENST00000427496 604 ntBASIC18.73■□□□□ 0.59
TPM3P06753 IGHV3-41-201ENST00000613121 348 ntBASIC18.73■□□□□ 0.59
TPM3P06753 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.73■□□□□ 0.59
TPM3P06753 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM3P06753 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM3P06753 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TPM3P06753 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TPM3P06753 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.73■□□□□ 0.59
TPM3P06753 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 AC073347.1-201ENST00000421633 2643 ntBASIC18.72■□□□□ 0.59
TPM3P06753 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 LINC00895-201ENST00000629028 1637 ntBASIC18.72■□□□□ 0.59
TPM3P06753 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 AC246785.2-201ENST00000432512 513 ntBASIC18.72■□□□□ 0.59
TPM3P06753 VENTXP7-201ENST00000475503 772 ntBASIC18.72■□□□□ 0.59
TPM3P06753 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.72■□□□□ 0.59
TPM3P06753 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.72■□□□□ 0.59
TPM3P06753 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TPM3P06753 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TPM3P06753 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TPM3P06753 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 AL365209.1-201ENST00000624418 6473 ntBASIC18.71■□□□□ 0.59
TPM3P06753 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TPM3P06753 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.71■□□□□ 0.59
TPM3P06753 AL645929.1-201ENST00000420084 975 ntBASIC18.71■□□□□ 0.59
TPM3P06753 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.71■□□□□ 0.59
TPM3P06753 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TPM3P06753 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.71■□□□□ 0.59
TPM3P06753 AC073592.5-201ENST00000624854 528 ntBASIC18.71■□□□□ 0.59
TPM3P06753 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms