Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SEMA3DO95025 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.99■□□□□ 0.15
SEMA3DO95025 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.99■□□□□ 0.15
SEMA3DO95025 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.99■□□□□ 0.15
SEMA3DO95025 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SEMA3DO95025 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.99■□□□□ 0.15
SEMA3DO95025 AC116407.3-201ENST00000623905 1129 ntBASIC15.99■□□□□ 0.15
SEMA3DO95025 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.99■□□□□ 0.15
SEMA3DO95025 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.99■□□□□ 0.15
SEMA3DO95025 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
SEMA3DO95025 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SEMA3DO95025 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SEMA3DO95025 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.98■□□□□ 0.15
SEMA3DO95025 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.98■□□□□ 0.15
SEMA3DO95025 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.98■□□□□ 0.15
SEMA3DO95025 FAM185BP-201ENST00000443595 716 ntBASIC15.98■□□□□ 0.15
SEMA3DO95025 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
SEMA3DO95025 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.98■□□□□ 0.15
SEMA3DO95025 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.98■□□□□ 0.15
SEMA3DO95025 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.98■□□□□ 0.15
SEMA3DO95025 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
SEMA3DO95025 ACTL9-202ENST00000612068 1252 ntBASIC15.98■□□□□ 0.15
SEMA3DO95025 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.98■□□□□ 0.15
SEMA3DO95025 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SEMA3DO95025 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SEMA3DO95025 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SEMA3DO95025 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.97■□□□□ 0.15
SEMA3DO95025 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.97■□□□□ 0.15
SEMA3DO95025 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SEMA3DO95025 MIR4751-201ENST00000578027 74 ntBASIC15.97■□□□□ 0.15
SEMA3DO95025 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.97■□□□□ 0.15
SEMA3DO95025 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.97■□□□□ 0.15
SEMA3DO95025 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 GGT3P-204ENST00000453783 1664 ntBASIC15.97■□□□□ 0.15
SEMA3DO95025 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SEMA3DO95025 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEMA3DO95025 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms