Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.94□□□□□ -0.02
ZIC3O60481 AP000842.3-202ENST00000569238 1080 ntBASIC14.94□□□□□ -0.02
ZIC3O60481 AC073389.1-201ENST00000595595 795 ntBASIC14.94□□□□□ -0.02
ZIC3O60481 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.94□□□□□ -0.02
ZIC3O60481 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.94□□□□□ -0.02
ZIC3O60481 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
ZIC3O60481 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
ZIC3O60481 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
ZIC3O60481 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 PRORSD1P-202ENST00000563365 2154 ntBASIC14.94□□□□□ -0.02
ZIC3O60481 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
ZIC3O60481 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.94□□□□□ -0.02
ZIC3O60481 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ZIC3O60481 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 KRT18P28-201ENST00000453838 1332 ntBASIC14.93□□□□□ -0.02
ZIC3O60481 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC3O60481 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ZIC3O60481 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC3O60481 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC3O60481 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
ZIC3O60481 AC023141.5-201ENST00000458585 616 ntBASIC14.93□□□□□ -0.02
ZIC3O60481 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.93□□□□□ -0.02
ZIC3O60481 HLA-J-203ENST00000494367 1087 ntBASIC14.93□□□□□ -0.02
ZIC3O60481 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.93□□□□□ -0.02
ZIC3O60481 PRYP6-201ENST00000514804 343 ntBASIC14.93□□□□□ -0.02
ZIC3O60481 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.93□□□□□ -0.02
ZIC3O60481 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.93□□□□□ -0.02
ZIC3O60481 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.93□□□□□ -0.02
ZIC3O60481 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
ZIC3O60481 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
ZIC3O60481 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.92□□□□□ -0.02
ZIC3O60481 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC3O60481 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC3O60481 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 SLC25A39P2-201ENST00000537614 270 ntBASIC14.92□□□□□ -0.02
ZIC3O60481 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.92□□□□□ -0.02
ZIC3O60481 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 AC009093.7-201ENST00000623853 1223 ntBASIC14.92□□□□□ -0.02
ZIC3O60481 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 PCGF3-213ENST00000620529 1899 ntBASIC14.92□□□□□ -0.02
ZIC3O60481 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.92□□□□□ -0.02
ZIC3O60481 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 FOXO1B-201ENST00000504678 1527 ntBASIC14.92□□□□□ -0.02
ZIC3O60481 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.92□□□□□ -0.02
ZIC3O60481 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ZIC3O60481 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
ZIC3O60481 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ZIC3O60481 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms