Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC28A2O43868 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC28A2O43868 AC109322.1-201ENST00000524499 1264 ntBASIC16.09■□□□□ 0.17
SLC28A2O43868 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 AC124947.2-201ENST00000547118 1133 ntBASIC16.09■□□□□ 0.17
SLC28A2O43868 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A2O43868 AL513210.1-201ENST00000629608 234 ntBASIC16.09■□□□□ 0.17
SLC28A2O43868 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 AL118508.1-201ENST00000613502 2345 ntBASIC16.09■□□□□ 0.17
SLC28A2O43868 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 AC132938.5-201ENST00000624980 1813 ntBASIC16.09■□□□□ 0.17
SLC28A2O43868 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC28A2O43868 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SLC28A2O43868 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC28A2O43868 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A2O43868 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A2O43868 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A2O43868 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC28A2O43868 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
SLC28A2O43868 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC28A2O43868 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A2O43868 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A2O43868 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SLC28A2O43868 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC28A2O43868 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 AC004461.1-201ENST00000412461 403 ntBASIC16.08■□□□□ 0.16
SLC28A2O43868 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A2O43868 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.08■□□□□ 0.16
SLC28A2O43868 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC28A2O43868 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A2O43868 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 AD001527.2-201ENST00000622994 785 ntBASIC16.08■□□□□ 0.16
SLC28A2O43868 AC004877.2-201ENST00000623941 599 ntBASIC16.08■□□□□ 0.16
SLC28A2O43868 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 BCAR1-209ENST00000546196 1340 ntBASIC16.08■□□□□ 0.16
SLC28A2O43868 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 PCDHA14-201ENST00000506751 2298 ntBASIC16.08■□□□□ 0.16
SLC28A2O43868 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
SLC28A2O43868 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC28A2O43868 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC28A2O43868 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC28A2O43868 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 FLJ38576-201ENST00000623820 2459 ntBASIC16.07■□□□□ 0.16
SLC28A2O43868 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SLC28A2O43868 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 OR8S1-201ENST00000310194 1080 ntBASIC16.07■□□□□ 0.16
SLC28A2O43868 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.07■□□□□ 0.16
SLC28A2O43868 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC28A2O43868 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 AC023141.5-201ENST00000458585 616 ntBASIC16.07■□□□□ 0.16
SLC28A2O43868 AC067863.1-201ENST00000494933 530 ntBASIC16.07■□□□□ 0.16
SLC28A2O43868 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC28A2O43868 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC28A2O43868 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC28A2O43868 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC28A2O43868 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms