Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 ATP5G2P1-201ENST00000433580 426 ntBASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 AL589182.2-201ENST00000619332 1049 ntBASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 GGT4P-201ENST00000623672 1708 ntBASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.28■□□□□ 0.2
TRAF6Q9Y4K3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 AC138894.3-201ENST00000603787 634 ntBASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAF6Q9Y4K3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TRAF6Q9Y4K3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRAF6Q9Y4K3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF6Q9Y4K3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF6Q9Y4K3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF6Q9Y4K3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAF6Q9Y4K3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 AL139288.1-201ENST00000623748 933 ntBASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 AL358472.4-201ENST00000633140 710 ntBASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAF6Q9Y4K3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms