Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 SLC25A3P1-201ENST00000443844 931 ntBASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 AL109954.1-202ENST00000564051 2148 ntBASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 AC006449.6-201ENST00000612330 2296 ntBASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 AL137784.3-201ENST00000623858 2288 ntBASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRCH1Q9Y2L9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 AC002310.6-201ENST00000624451 1377 ntBASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 KRT18P21-201ENST00000515767 1272 ntBASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.89■□□□□ 0.13
LRCH1Q9Y2L9 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 KRT18P65-201ENST00000439811 1286 ntBASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 TSPY17P-201ENST00000450329 467 ntBASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.88■□□□□ 0.13
LRCH1Q9Y2L9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms