Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SLC22A20-204ENST00000530038 1673 ntBASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM1Q8N8F7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 HCG4-201ENST00000418983 998 ntBASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 HNRNPDP1-201ENST00000439535 754 ntBASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.3■□□□□ 0.04
LSMEM1Q8N8F7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 AL671710.1-201ENST00000610245 2349 ntBASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PMS2P1-201ENST00000431037 1228 ntBASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 AP001350.2-201ENST00000625104 1094 ntBASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LSMEM1Q8N8F7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms