Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NCK1P16333 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NCK1P16333 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.8■□□□□ 0.12
NCK1P16333 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 AC073347.1-201ENST00000421633 2643 ntBASIC15.8■□□□□ 0.12
NCK1P16333 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
NCK1P16333 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.8■□□□□ 0.12
NCK1P16333 AL020989.1-201ENST00000422979 469 ntBASIC15.8■□□□□ 0.12
NCK1P16333 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.8■□□□□ 0.12
NCK1P16333 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.8■□□□□ 0.12
NCK1P16333 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.8■□□□□ 0.12
NCK1P16333 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 KRT8P26-201ENST00000534154 1276 ntBASIC15.8■□□□□ 0.12
NCK1P16333 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.8■□□□□ 0.12
NCK1P16333 AC013467.2-201ENST00000605472 835 ntBASIC15.8■□□□□ 0.12
NCK1P16333 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NCK1P16333 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NCK1P16333 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.8■□□□□ 0.12
NCK1P16333 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.8■□□□□ 0.12
NCK1P16333 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
NCK1P16333 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NCK1P16333 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NCK1P16333 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NCK1P16333 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 AC243591.1-201ENST00000452967 1364 ntBASIC15.79■□□□□ 0.12
NCK1P16333 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.79■□□□□ 0.12
NCK1P16333 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 LINC00982-205ENST00000420957 435 ntBASIC15.79■□□□□ 0.12
NCK1P16333 AC104076.2-201ENST00000448912 469 ntBASIC15.79■□□□□ 0.12
NCK1P16333 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.79■□□□□ 0.12
NCK1P16333 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.79■□□□□ 0.12
NCK1P16333 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.79■□□□□ 0.12
NCK1P16333 AL139011.1-202ENST00000642063 584 ntBASIC15.79■□□□□ 0.12
NCK1P16333 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 SNX33P1-201ENST00000592116 1762 ntBASIC15.79■□□□□ 0.12
NCK1P16333 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.79■□□□□ 0.12
NCK1P16333 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.79■□□□□ 0.12
NCK1P16333 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NCK1P16333 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NCK1P16333 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
NCK1P16333 INTS4P1-201ENST00000438455 1935 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms