Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AC004790.2-201ENST00000623588 572 ntBASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCKIPSDQ9NZQ3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 AC097637.2-201ENST00000624096 1997 ntBASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NCKIPSDQ9NZQ3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 AC096734.2-201ENST00000562054 433 ntBASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.91■□□□□ 0.3
NCKIPSDQ9NZQ3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 AC092171.3-201ENST00000610122 2651 ntBASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NCKIPSDQ9NZQ3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms