Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 GPAA1P2-202ENST00000606848 1787 ntBASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMARCD1Q96GM5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 HLA-A-202ENST00000376806 1854 ntBASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 AC027307.2-201ENST00000591252 911 ntBASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 AC009093.7-201ENST00000623853 1223 ntBASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 AC106886.4-201ENST00000623557 2502 ntBASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 GGT4P-201ENST00000623672 1708 ntBASIC17.5■□□□□ 0.39
SMARCD1Q96GM5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 TSEN15P1-201ENST00000423257 515 ntBASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 KRT18P32-201ENST00000424695 1287 ntBASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 METTL21AP1-201ENST00000438852 635 ntBASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMARCD1Q96GM5 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 KRT18P28-201ENST00000453838 1332 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 UXT-AS1-201ENST00000590504 1525 ntBASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.48■□□□□ 0.39
SMARCD1Q96GM5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms