Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 FAM86GP-201ENST00000448322 971 ntBASIC19.11■□□□□ 0.65
USH1GQ495M9 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USH1GQ495M9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.11■□□□□ 0.65
USH1GQ495M9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
USH1GQ495M9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
USH1GQ495M9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
USH1GQ495M9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USH1GQ495M9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.11■□□□□ 0.65
USH1GQ495M9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.11■□□□□ 0.65
USH1GQ495M9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USH1GQ495M9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 AL603756.1-201ENST00000606511 2163 ntBASIC19.1■□□□□ 0.65
USH1GQ495M9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 OR6D1P-203ENST00000641209 4860 ntBASIC19.1■□□□□ 0.65
USH1GQ495M9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 AC080080.1-201ENST00000625121 2420 ntBASIC19.1■□□□□ 0.65
USH1GQ495M9 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.1■□□□□ 0.65
USH1GQ495M9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.1■□□□□ 0.65
USH1GQ495M9 AP002490.2-201ENST00000524791 560 ntBASIC19.1■□□□□ 0.65
USH1GQ495M9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
USH1GQ495M9 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.1■□□□□ 0.65
USH1GQ495M9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.1■□□□□ 0.65
USH1GQ495M9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
USH1GQ495M9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
USH1GQ495M9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.09■□□□□ 0.65
USH1GQ495M9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
USH1GQ495M9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.09■□□□□ 0.65
USH1GQ495M9 AC026150.2-201ENST00000564693 1156 ntBASIC19.09■□□□□ 0.65
USH1GQ495M9 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.09■□□□□ 0.65
USH1GQ495M9 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.09■□□□□ 0.65
USH1GQ495M9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.09■□□□□ 0.65
USH1GQ495M9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.09■□□□□ 0.65
USH1GQ495M9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
USH1GQ495M9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
USH1GQ495M9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms