Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
AP3S2P59780 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
AP3S2P59780 ID1-201ENST00000376105 1233 ntBASIC14.38□□□□□ -0.11
AP3S2P59780 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.38□□□□□ -0.11
AP3S2P59780 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.38□□□□□ -0.11
AP3S2P59780 AC128676.1-201ENST00000454392 318 ntBASIC14.38□□□□□ -0.11
AP3S2P59780 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.38□□□□□ -0.11
AP3S2P59780 AC068472.1-201ENST00000474589 881 ntBASIC14.38□□□□□ -0.11
AP3S2P59780 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 STK25P1-201ENST00000585406 838 ntBASIC14.38□□□□□ -0.11
AP3S2P59780 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.38□□□□□ -0.11
AP3S2P59780 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
AP3S2P59780 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.38□□□□□ -0.11
AP3S2P59780 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 GGT3P-204ENST00000453783 1664 ntBASIC14.37□□□□□ -0.11
AP3S2P59780 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
AP3S2P59780 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.37□□□□□ -0.11
AP3S2P59780 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.37□□□□□ -0.11
AP3S2P59780 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.37□□□□□ -0.11
AP3S2P59780 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.37□□□□□ -0.11
AP3S2P59780 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.37□□□□□ -0.11
AP3S2P59780 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.37□□□□□ -0.11
AP3S2P59780 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP3S2P59780 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.37□□□□□ -0.11
AP3S2P59780 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP3S2P59780 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AP3S2P59780 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
AP3S2P59780 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms