Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CTNNA1P35221 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.69■□□□□ 0.42
CTNNA1P35221 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CTNNA1P35221 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
CTNNA1P35221 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTNNA1P35221 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.68■□□□□ 0.42
CTNNA1P35221 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CTNNA1P35221 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.68■□□□□ 0.42
CTNNA1P35221 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.68■□□□□ 0.42
CTNNA1P35221 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 AL139288.1-201ENST00000623748 933 ntBASIC17.68■□□□□ 0.42
CTNNA1P35221 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 MTHFR-217ENST00000641820 1569 ntBASIC17.68■□□□□ 0.42
CTNNA1P35221 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.68■□□□□ 0.42
CTNNA1P35221 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 AC024909.3-201ENST00000611513 2257 ntBASIC17.68■□□□□ 0.42
CTNNA1P35221 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CTNNA1P35221 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTNNA1P35221 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 TOP3BP1-201ENST00000420768 1380 ntBASIC17.67■□□□□ 0.42
CTNNA1P35221 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 RBM17P3-201ENST00000417687 1192 ntBASIC17.67■□□□□ 0.42
CTNNA1P35221 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNNA1P35221 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.67■□□□□ 0.42
CTNNA1P35221 NKAPP1-205ENST00000585790 367 ntBASIC17.67■□□□□ 0.42
CTNNA1P35221 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.67■□□□□ 0.42
CTNNA1P35221 AL139424.1-201ENST00000607572 797 ntBASIC17.67■□□□□ 0.42
CTNNA1P35221 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.67■□□□□ 0.42
CTNNA1P35221 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.67■□□□□ 0.42
CTNNA1P35221 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.67■□□□□ 0.42
CTNNA1P35221 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTNNA1P35221 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTNNA1P35221 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms