Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.65■■■□□ 2.5
RTCBQ9Y3I0 AC010997.5-201ENST00000609182 354 ntBASIC30.65■■■□□ 2.5
RTCBQ9Y3I0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
RTCBQ9Y3I0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RTCBQ9Y3I0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RTCBQ9Y3I0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
RTCBQ9Y3I0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RTCBQ9Y3I0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.64■■■□□ 2.5
RTCBQ9Y3I0 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
RTCBQ9Y3I0 MIR3621-201ENST00000580529 85 ntBASIC30.64■■■□□ 2.5
RTCBQ9Y3I0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.64■■■□□ 2.5
RTCBQ9Y3I0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
RTCBQ9Y3I0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 BX255925.1-201ENST00000566954 1854 ntBASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 AC110285.6-201ENST00000617652 491 ntBASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.63■■■□□ 2.49
RTCBQ9Y3I0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
RTCBQ9Y3I0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RTCBQ9Y3I0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RTCBQ9Y3I0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
RTCBQ9Y3I0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTCBQ9Y3I0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 MIR6724-1-201ENST00000616420 92 ntBASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 MIR6724-2-201ENST00000616483 92 ntBASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 MIR6724-4-201ENST00000617390 92 ntBASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 MIR6724-3-201ENST00000622482 92 ntBASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RTCBQ9Y3I0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RTCBQ9Y3I0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RTCBQ9Y3I0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
RTCBQ9Y3I0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
RTCBQ9Y3I0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RTCBQ9Y3I0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RTCBQ9Y3I0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
RTCBQ9Y3I0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.57■■■□□ 2.48
RTCBQ9Y3I0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC30.57■■■□□ 2.48
RTCBQ9Y3I0 MTDHP2-201ENST00000601468 714 ntBASIC30.57■■■□□ 2.48
RTCBQ9Y3I0 AC005837.3-201ENST00000612163 286 ntBASIC30.57■■■□□ 2.48
RTCBQ9Y3I0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RTCBQ9Y3I0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.56■■■□□ 2.48
RTCBQ9Y3I0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RTCBQ9Y3I0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.56■■■□□ 2.48
RTCBQ9Y3I0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC30.56■■■□□ 2.48
RTCBQ9Y3I0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC30.56■■■□□ 2.48
RTCBQ9Y3I0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 AL356740.2-201ENST00000601559 647 ntBASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
RTCBQ9Y3I0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RTCBQ9Y3I0 AC096631.2-201ENST00000436136 790 ntBASIC30.54■■■□□ 2.48
RTCBQ9Y3I0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.53■■■□□ 2.48
RTCBQ9Y3I0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.53■■■□□ 2.48
RTCBQ9Y3I0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RTCBQ9Y3I0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 MIR4466-201ENST00000606121 54 ntBASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTCBQ9Y3I0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.48
RTCBQ9Y3I0 LINC01003-201ENST00000564834 1764 ntBASIC30.51■■■□□ 2.48
RTCBQ9Y3I0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.51■■■□□ 2.48
RTCBQ9Y3I0 DRD5P2-201ENST00000421395 2012 ntBASIC30.51■■■□□ 2.47
RTCBQ9Y3I0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
RTCBQ9Y3I0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.51■■■□□ 2.47
RTCBQ9Y3I0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RTCBQ9Y3I0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.49■■■□□ 2.47
RTCBQ9Y3I0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.49■■■□□ 2.47
RTCBQ9Y3I0 AC142472.1-201ENST00000612013 1741 ntBASIC30.49■■■□□ 2.47
RTCBQ9Y3I0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.48■■■□□ 2.47
RTCBQ9Y3I0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.48■■■□□ 2.47
RTCBQ9Y3I0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RTCBQ9Y3I0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.47■■■□□ 2.47
RTCBQ9Y3I0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms