Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 ANKRD11-209ENST00000564553 471 ntTSL 316.41■□□□□ 0.228e-7■■■■□ 21.4
DDX52Q9Y2R4 ANKRD11-206ENST00000562275 2762 ntTSL 515.82■□□□□ 0.128e-7■■■■□ 21.4
DDX52Q9Y2R4 ANKRD11-202ENST00000330736 8342 ntTSL 513.65□□□□□ -0.228e-7■■■■□ 21.4
DDX52Q9Y2R4 ANKRD11-207ENST00000562816 573 ntTSL 413.37□□□□□ -0.278e-7■■■■□ 21.4
DDX52Q9Y2R4 CAPN15-202ENST00000562370 942 ntTSL 231.4■■■□□ 2.622e-6■■■■□ 21.3
DDX52Q9Y2R4 CAPN15-207ENST00000568988 911 ntTSL 331.4■■■□□ 2.622e-6■■■■□ 21.3
DDX52Q9Y2R4 UBE2J2-216ENST00000488418 750 ntTSL 222.34■■□□□ 1.175e-6■■■■□ 21.2
DDX52Q9Y2R4 GSE1-215ENST00000635906 666 ntTSL 314.36□□□□□ -0.112e-6■■■■□ 21.2
DDX52Q9Y2R4 ZNF326-204ENST00000394583 1956 ntTSL 1 (best)21.93■■□□□ 1.12e-9■■■■□ 21.1
DDX52Q9Y2R4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.92e-9■■■■□ 21.1
DDX52Q9Y2R4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.892e-9■■■■□ 21.1
DDX52Q9Y2R4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.742e-9■■■■□ 21.1
DDX52Q9Y2R4 PPFIA1-222ENST00000532504 5159 ntTSL 1 (best)17.07■□□□□ 0.322e-9■■■■□ 21.1
DDX52Q9Y2R4 ZNF326-201ENST00000340281 2729 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.22e-9■■■■□ 21.1
DDX52Q9Y2R4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.212e-9■■■■□ 21.1
DDX52Q9Y2R4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.131e-7■■■■□ 21.1
DDX52Q9Y2R4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.841e-7■■■■□ 21.1
DDX52Q9Y2R4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC34.02■■■■□ 3.042e-8■■■■□ 21
DDX52Q9Y2R4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.972e-8■■■■□ 21
DDX52Q9Y2R4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.6■■□□□ 1.532e-8■■■■□ 21
DDX52Q9Y2R4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.46■■■□□ 2.151e-6■■■■□ 20.9
DDX52Q9Y2R4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.751e-6■■■■□ 20.9
DDX52Q9Y2R4 CTBP1-208ENST00000506180 843 ntTSL 521.74■■□□□ 1.071e-6■■■■□ 20.9
DDX52Q9Y2R4 PKP3-206ENST00000528036 940 ntTSL 227.44■■□□□ 1.982e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-210ENST00000533249 1111 ntTSL 327.1■■□□□ 1.932e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-211ENST00000534401 756 ntTSL 325.46■■□□□ 1.672e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-205ENST00000527442 847 ntTSL 324.49■■□□□ 1.512e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-210ENST00000496816 2222 ntTSL 1 (best)22.36■■□□□ 1.172e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.49■■□□□ 1.032e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-208ENST00000531857 687 ntTSL 420.54■□□□□ 0.882e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-207ENST00000530695 441 ntTSL 520.18■□□□□ 0.822e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-209ENST00000533069 590 ntTSL 219.77■□□□□ 0.762e-6■■■■□ 20.8
DDX52Q9Y2R4 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.742e-6■■■■□ 20.8
DDX52Q9Y2R4 ASMTL-AS1-204ENST00000443929 574 ntTSL 219.27■□□□□ 0.684e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-TNFRSF6B-204ENST00000496281 5314 ntTSL 218.69■□□□□ 0.582e-6■■■■□ 20.8
DDX52Q9Y2R4 MICALL2-210ENST00000482839 852 ntTSL 218.09■□□□□ 0.492e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.47■□□□□ 0.392e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-TNFRSF6B-201ENST00000480273 5751 ntTSL 217.44■□□□□ 0.382e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.87■□□□□ 0.132e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-TNFRSF6B-203ENST00000492259 4824 ntAPPRIS ALT2 TSL 515.86■□□□□ 0.132e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.57■□□□□ 0.082e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.062e-6■■■■□ 20.8
DDX52Q9Y2R4 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC14.03□□□□□ -0.162e-6■■■■□ 20.8
DDX52Q9Y2R4 KCNIP2-209ENST00000434163 534 ntTSL 1 (best)11.79□□□□□ -0.522e-6■■■■□ 20.8
DDX52Q9Y2R4 PDCD6-209ENST00000512466 3763 ntTSL 211.58□□□□□ -0.558e-7■■■■□ 20.8
DDX52Q9Y2R4 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)15.28■□□□□ 0.044e-6■■■■□ 20.8
DDX52Q9Y2R4 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC13.51□□□□□ -0.254e-6■■■■□ 20.8
DDX52Q9Y2R4 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)12.25□□□□□ -0.454e-6■■■■□ 20.8
DDX52Q9Y2R4 CXXC5-210ENST00000509238 542 ntTSL 219.79■□□□□ 0.764e-6■■■■□ 20.7
DDX52Q9Y2R4 PTP4A3-205ENST00000523147 558 ntTSL 524.84■■□□□ 1.573e-6■■■■□ 20.7
DDX52Q9Y2R4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.713e-6■■■■□ 20.7
DDX52Q9Y2R4 RNA5SP389-201ENST00000362610 115 ntBASIC9.25□□□□□ -0.937e-46■■■■□ 20.7
DDX52Q9Y2R4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.983e-7■■■■□ 20.7
DDX52Q9Y2R4 SPRED2-205ENST00000440972 555 ntTSL 315.36■□□□□ 0.055e-8■■■■□ 20.7
DDX52Q9Y2R4 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC13.92□□□□□ -0.185e-8■■■■□ 20.7
DDX52Q9Y2R4 CXXC5-214ENST00000512816 558 ntTSL 319.79■□□□□ 0.761e-6■■■■□ 20.6
DDX52Q9Y2R4 DOT1L-205ENST00000478937 638 ntTSL 315.65■□□□□ 0.13e-6■■■■□ 20.6
DDX52Q9Y2R4 SEPT5-203ENST00000406172 1996 ntTSL 528.06■■■□□ 2.083e-6■■■■□ 20.6
DDX52Q9Y2R4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.613e-6■■■■□ 20.6
DDX52Q9Y2R4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.61■□□□□ 0.573e-6■■■■□ 20.6
DDX52Q9Y2R4 SEPT5-205ENST00000412544 1108 ntTSL 518.4■□□□□ 0.543e-6■■■■□ 20.6
DDX52Q9Y2R4 CD81-205ENST00000475945 606 ntTSL 220.43■□□□□ 0.864e-6■■■■□ 20.6
DDX52Q9Y2R4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.554e-6■■■■□ 20.6
DDX52Q9Y2R4 CD81-215ENST00000530648 558 ntTSL 416.56■□□□□ 0.244e-6■■■■□ 20.6
DDX52Q9Y2R4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.282e-6■■■■□ 20.5
DDX52Q9Y2R4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.11■■■□□ 2.892e-6■■■■□ 20.5
DDX52Q9Y2R4 ARID3A-204ENST00000585895 377 ntTSL 230.93■■■□□ 2.542e-6■■■■□ 20.5
DDX52Q9Y2R4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.372e-6■■■■□ 20.5
DDX52Q9Y2R4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.172e-6■■■■□ 20.5
DDX52Q9Y2R4 PPP1R37-206ENST00000544069 712 ntTSL 527.85■■■□□ 2.052e-6■■■■□ 20.5
DDX52Q9Y2R4 TBC1D5-223ENST00000471679 435 ntTSL 427.71■■■□□ 2.032e-6■■■■□ 20.5
DDX52Q9Y2R4 CDC34-205ENST00000606065 1062 ntTSL 526.65■■□□□ 1.862e-6■■■■□ 20.5
DDX52Q9Y2R4 KLF16-202ENST00000541015 1134 ntTSL 1 (best)26.16■■□□□ 1.782e-6■■■■□ 20.5
DDX52Q9Y2R4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.692e-6■■■■□ 20.5
DDX52Q9Y2R4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.47■■□□□ 1.672e-6■■■■□ 20.5
DDX52Q9Y2R4 AC003102.1-202ENST00000563394 1796 ntBASIC25.16■■□□□ 1.622e-6■■■■□ 20.5
DDX52Q9Y2R4 TBC1D5-227ENST00000485432 566 ntTSL 424.72■■□□□ 1.552e-6■■■■□ 20.5
DDX52Q9Y2R4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.49■■□□□ 1.512e-6■■■■□ 20.5
DDX52Q9Y2R4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.14■■□□□ 1.452e-6■■■■□ 20.5
DDX52Q9Y2R4 MAEA-206ENST00000503693 1182 ntTSL 1 (best)23.28■■□□□ 1.324e-6■■■■□ 20.5
DDX52Q9Y2R4 PTBP3-201ENST00000210227 734 ntTSL 223.1■■□□□ 1.292e-6■■■■□ 20.5
DDX52Q9Y2R4 CYBA-203ENST00000562209 624 ntTSL 523.09■■□□□ 1.292e-6■■■■□ 20.5
DDX52Q9Y2R4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.292e-6■■■■□ 20.5
DDX52Q9Y2R4 CDC34-206ENST00000606400 899 ntTSL 222.25■■□□□ 1.152e-6■■■■□ 20.5
DDX52Q9Y2R4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.142e-6■■■■□ 20.5
DDX52Q9Y2R4 TBC1D5-221ENST00000452492 581 ntTSL 321.64■■□□□ 1.052e-6■■■■□ 20.5
DDX52Q9Y2R4 CDC34-202ENST00000586283 1147 ntTSL 321.46■■□□□ 1.032e-6■■■■□ 20.5
DDX52Q9Y2R4 TBC1D5-203ENST00000414318 2088 ntTSL 521.39■■□□□ 1.012e-6■■■■□ 20.5
DDX52Q9Y2R4 PPP1R37-203ENST00000496125 555 ntTSL 320.93■□□□□ 0.942e-6■■■■□ 20.5
DDX52Q9Y2R4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.942e-6■■■■□ 20.5
DDX52Q9Y2R4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.79■□□□□ 0.922e-6■■■■□ 20.5
DDX52Q9Y2R4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.46■□□□□ 0.872e-6■■■■□ 20.5
DDX52Q9Y2R4 AARS-207ENST00000569825 871 ntTSL 220.32■□□□□ 0.842e-6■■■■□ 20.5
DDX52Q9Y2R4 MICALL2-206ENST00000470807 668 ntTSL 320.29■□□□□ 0.842e-6■■■■□ 20.5
DDX52Q9Y2R4 MAEA-216ENST00000512308 839 ntTSL 520.01■□□□□ 0.794e-6■■■■□ 20.5
DDX52Q9Y2R4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.92■□□□□ 0.782e-6■■■■□ 20.5
DDX52Q9Y2R4 MICALL2-215ENST00000496184 2722 ntTSL 219.82■□□□□ 0.762e-6■■■■□ 20.5
DDX52Q9Y2R4 MAEA-211ENST00000509254 598 ntTSL 419.07■□□□□ 0.644e-6■■■■□ 20.5
DDX52Q9Y2R4 CYBA-202ENST00000561972 464 ntTSL 318.91■□□□□ 0.622e-6■■■■□ 20.5
DDX52Q9Y2R4 MICALL2-207ENST00000471899 899 ntTSL 218.63■□□□□ 0.572e-6■■■■□ 20.5
Retrieved 100 of 4,483 protein–RNA pairs in 80.2 ms