RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 NISCHQ9Y2I1 1504 aa49.34■■■■■ 5.49
PTBP3-201ENST00000210227 ABCC9O60706 1549 aa44.5■■■■■ 4.71
PTBP3-201ENST00000210227 CCDC180Q9P1Z9 1646 aa44.48■■■■■ 4.71
PTBP3-201ENST00000210227 RB1CC1Q8TDY2 1594 aa42.35■■■■■ 4.37
PTBP3-201ENST00000210227 NACADO15069 1562 aa41.99■■■■■ 4.31
PTBP3-201ENST00000210227 DNAJC5BQ9UF47 199 aa41.8■■■■■ 4.28
PTBP3-201ENST00000210227 DCAF8L2P0C7V8 631 aa41.54■■■■■ 4.24
PTBP3-201ENST00000210227 UNC13AQ9UPW8 1703 aa41.51■■■■■ 4.24
PTBP3-201ENST00000210227 MYO15BQ96JP2 1530 aa41.35■■■■■ 4.21
PTBP3-201ENST00000210227 PABPN1Q86U42 306 aaKnown RBP eCLIP41.3■■■■■ 4.2
PTBP3-201ENST00000210227 BICRAQ9NZM4 1560 aa41.13■■■■■ 4.18
PTBP3-201ENST00000210227 ZCCHC6Q5VYS8 1495 aaKnown RBP40.89■■■■■ 4.14
PTBP3-201ENST00000210227 DCAF1Q9Y4B6 1507 aa40.77■■■■■ 4.12
PTBP3-201ENST00000210227 SHROOM4Q9ULL8 1493 aa40.57■■■■■ 4.08
PTBP3-201ENST00000210227 SCRIBQ14160 1630 aa40.46■■■■■ 4.07
PTBP3-201ENST00000210227 CC2D2AQ9P2K1 1620 aa40.25■■■■■ 4.03
PTBP3-201ENST00000210227 EIF4G1Q04637 1599 aaKnown RBP40.12■■■■■ 4.01
PTBP3-201ENST00000210227 CECR2Q9BXF3 1484 aa40.11■■■■■ 4.01
PTBP3-201ENST00000210227 NCAPD3P42695 1498 aa38.71■■■■□ 3.79
PTBP3-201ENST00000210227 SMARCA4P51532 1647 aa38.59■■■■□ 3.77
PTBP3-201ENST00000210227 ATAD2BQ9ULI0 1458 aa38.59■■■■□ 3.77
PTBP3-201ENST00000210227 SMARCA2P51531 1590 aa38.52■■■■□ 3.76
PTBP3-201ENST00000210227 DNAJC5Q9H3Z4 198 aa38.51■■■■□ 3.76
PTBP3-201ENST00000210227 HMGXB3Q12766 1538 aa38.5■■■■□ 3.75
PTBP3-201ENST00000210227 CUX2O14529 1486 aa38.46■■■■□ 3.75
PTBP3-201ENST00000210227 ERCC6Q03468 1493 aa38.44■■■■□ 3.74
PTBP3-201ENST00000210227 BAZ1AQ9NRL2 1556 aaPredicted RBP38.33■■■■□ 3.73
PTBP3-201ENST00000210227 BAZ1BQ9UIG0 1483 aaKnown RBP38.23■■■■□ 3.71
PTBP3-201ENST00000210227 PEG3Q9GZU2 1588 aa38.2■■■■□ 3.71
PTBP3-201ENST00000210227 NESP48681 1621 aa38.2■■■■□ 3.7
PTBP3-201ENST00000210227 MROH2BQ7Z745 1585 aa38.02■■■■□ 3.68
PTBP3-201ENST00000210227 THOC2Q8NI27 1593 aaKnown RBP37.94■■■■□ 3.66
PTBP3-201ENST00000210227 LAMC3Q9Y6N6 1575 aa37.94■■■■□ 3.66
PTBP3-201ENST00000210227 KIF21AQ7Z4S6 1674 aa37.82■■■■□ 3.64
PTBP3-201ENST00000210227 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
PTBP3-201ENST00000210227 WIZO95785 1651 aa37.6■■■■□ 3.61
PTBP3-201ENST00000210227 CADPSQ9ULU8 1353 aa37.5■■■■□ 3.59
PTBP3-201ENST00000210227 MRC2Q9UBG0 1479 aa37.39■■■■□ 3.58
PTBP3-201ENST00000210227 WDR62O43379 1518 aa37.34■■■■□ 3.57
PTBP3-201ENST00000210227 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
PTBP3-201ENST00000210227 FANCD2Q9BXW9 1451 aa37.13■■■■□ 3.53
PTBP3-201ENST00000210227 RSF1Q96T23 1441 aaPredicted RBP37.11■■■■□ 3.53
PTBP3-201ENST00000210227 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
PTBP3-201ENST00000210227 CFTRP13569 1480 aa37.07■■■■□ 3.53
PTBP3-201ENST00000210227 PRDM2Q13029 1718 aa36.9■■■■□ 3.5
PTBP3-201ENST00000210227 URB2Q14146 1524 aaKnown RBP36.85■■■■□ 3.49
PTBP3-201ENST00000210227 TRIM41Q8WV44 630 aa36.76■■■■□ 3.48
PTBP3-201ENST00000210227 CCDC88BA6NC98 1476 aa36.61■■■■□ 3.45
PTBP3-201ENST00000210227 OSCARQ8IYS5 282 aa36.53■■■■□ 3.44
PTBP3-201ENST00000210227 IFT140Q96RY7 1462 aa36.44■■■■□ 3.42
PTBP3-201ENST00000210227 TOPBP1Q92547 1522 aa36.43■■■■□ 3.42
PTBP3-201ENST00000210227 ZNF608Q9ULD9 1512 aaPredicted RBP36.41■■■■□ 3.42
PTBP3-201ENST00000210227 DNMBPQ6XZF7 1577 aa36.32■■■■□ 3.4
PTBP3-201ENST00000210227 EIF4G3O43432 1585 aaKnown RBP36.3■■■■□ 3.4
PTBP3-201ENST00000210227 ABCC8Q09428 1581 aa36.3■■■■□ 3.4
PTBP3-201ENST00000210227 RIMBP3CA6NJZ7 1639 aa36.26■■■■□ 3.4
PTBP3-201ENST00000210227 RIMBP3BA6NNM3 1639 aa36.26■■■■□ 3.4
PTBP3-201ENST00000210227 RIMBP3Q9UFD9 1639 aa36.26■■■■□ 3.4
PTBP3-201ENST00000210227 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
PTBP3-201ENST00000210227 ARHGEF11O15085 1522 aa36.1■■■■□ 3.37
PTBP3-201ENST00000210227 CHD1O14646 1710 aa36.09■■■■□ 3.37
PTBP3-201ENST00000210227 POLA1P09884 1462 aaPredicted RBP36.04■■■■□ 3.36
PTBP3-201ENST00000210227 AQRO60306 1485 aaKnown RBP eCLIP36.02■■■■□ 3.36
PTBP3-201ENST00000210227 RAD54L2Q9Y4B4 1467 aa35.87■■■■□ 3.33
PTBP3-201ENST00000210227 WDR97A6NE52 1622 aa35.8■■■■□ 3.32
PTBP3-201ENST00000210227 SOGA1O94964 1423 aa35.8■■■■□ 3.32
PTBP3-201ENST00000210227 FGD5Q6ZNL6 1462 aa35.8■■■■□ 3.32
PTBP3-201ENST00000210227 FBLN2P98095 1184 aa35.75■■■■□ 3.31
PTBP3-201ENST00000210227 TDRD9Q8NDG6 1382 aaKnown RBP35.75■■■■□ 3.31
PTBP3-201ENST00000210227 CUX1P39880 1505 aa35.74■■■■□ 3.31
PTBP3-201ENST00000210227 ARAP1Q96P48 1450 aa35.73■■■■□ 3.31
PTBP3-201ENST00000210227 SNAPC4Q5SXM2 1469 aa35.7■■■■□ 3.31
PTBP3-201ENST00000210227 CYB5RLQ6IPT4 315 aa35.7■■■■□ 3.31
PTBP3-201ENST00000210227 CLASP1Q7Z460 1538 aa35.62■■■■□ 3.29
PTBP3-201ENST00000210227 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
PTBP3-201ENST00000210227 SYNJ1O43426 1573 aa35.56■■■■□ 3.28
PTBP3-201ENST00000210227 GRIN2BQ13224 1484 aa35.56■■■■□ 3.28
PTBP3-201ENST00000210227 PBRM1Q86U86 1689 aa35.55■■■■□ 3.28
PTBP3-201ENST00000210227 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
PTBP3-201ENST00000210227 CHMP7Q8WUX9 453 aaPredicted RBP35.46■■■■□ 3.27
PTBP3-201ENST00000210227 ABCA5Q8WWZ7 1642 aa35.42■■■■□ 3.26
PTBP3-201ENST00000210227 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
PTBP3-201ENST00000210227 ABCA10Q8WWZ4 1543 aa35.37■■■■□ 3.25
PTBP3-201ENST00000210227 TRHP20396 242 aaPredicted RBP35.35■■■■□ 3.25
PTBP3-201ENST00000210227 SUPT5HO00267 1087 aaKnown RBP35.25■■■■□ 3.23
PTBP3-201ENST00000210227 BIVM-ERCC5R4GMW8 1640 aa35.19■■■■□ 3.22
PTBP3-201ENST00000210227 ADAMTS12P58397 1594 aa35.16■■■■□ 3.22
PTBP3-201ENST00000210227 WRNQ14191 1432 aaPredicted RBP eCLIP35.15■■■■□ 3.22
PTBP3-201ENST00000210227 TOP2BQ02880 1626 aa35.15■■■■□ 3.22
PTBP3-201ENST00000210227 GRIN2AQ12879 1464 aa35.13■■■■□ 3.21
PTBP3-201ENST00000210227 CEP170Q5SW79 1584 aa35.05■■■■□ 3.2
PTBP3-201ENST00000210227 ERCC6L2Q5T890 1561 aa35.03■■■■□ 3.2
PTBP3-201ENST00000210227 NUP160Q12769 1436 aa35■■■■□ 3.19
PTBP3-201ENST00000210227 SHROOM2Q13796 1616 aa34.95■■■■□ 3.18
PTBP3-201ENST00000210227 FHAD1B1AJZ9 1412 aa34.94■■■■□ 3.18
PTBP3-201ENST00000210227 ERICH3Q5RHP9 1530 aa34.94■■■■□ 3.18
PTBP3-201ENST00000210227 RUSC2Q8N2Y8 1516 aa34.68■■■■□ 3.14
PTBP3-201ENST00000210227 PRG4Q92954 1404 aaPredicted RBP34.64■■■■□ 3.14
PTBP3-201ENST00000210227 KIF13AQ9H1H9 1805 aa34.6■■■■□ 3.13
PTBP3-201ENST00000210227 JPH4Q96JJ6 628 aa34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms