Protein–RNA interactions for Protein: Q9UM44

HHLA2, HERV-H LTR-associating protein 2, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA2Q9UM44 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HHLA2Q9UM44 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.78■□□□□ 0.92
HHLA2Q9UM44 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HHLA2Q9UM44 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HHLA2Q9UM44 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HHLA2Q9UM44 MIR3648-2-201ENST00000581792 180 ntBASIC20.78■□□□□ 0.92
HHLA2Q9UM44 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.78■□□□□ 0.92
HHLA2Q9UM44 MIR3648-1-201ENST00000615959 180 ntBASIC20.78■□□□□ 0.92
HHLA2Q9UM44 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HHLA2Q9UM44 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
HHLA2Q9UM44 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HHLA2Q9UM44 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HHLA2Q9UM44 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.77■□□□□ 0.92
HHLA2Q9UM44 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
HHLA2Q9UM44 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HHLA2Q9UM44 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HHLA2Q9UM44 SLC6A10P-202ENST00000431994 2058 ntBASIC20.74■□□□□ 0.91
HHLA2Q9UM44 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HHLA2Q9UM44 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HHLA2Q9UM44 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HHLA2Q9UM44 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 LINC01124-201ENST00000409786 2117 ntBASIC20.71■□□□□ 0.91
HHLA2Q9UM44 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HHLA2Q9UM44 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HHLA2Q9UM44 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HHLA2Q9UM44 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.7■□□□□ 0.9
HHLA2Q9UM44 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
HHLA2Q9UM44 AC016575.1-201ENST00000607026 382 ntBASIC20.7■□□□□ 0.9
HHLA2Q9UM44 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HHLA2Q9UM44 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 MIR7108-201ENST00000614319 87 ntBASIC20.69■□□□□ 0.9
HHLA2Q9UM44 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HHLA2Q9UM44 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HHLA2Q9UM44 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.68■□□□□ 0.9
HHLA2Q9UM44 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.68■□□□□ 0.9
HHLA2Q9UM44 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHLA2Q9UM44 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHLA2Q9UM44 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HHLA2Q9UM44 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HHLA2Q9UM44 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HHLA2Q9UM44 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.67■□□□□ 0.9
HHLA2Q9UM44 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HHLA2Q9UM44 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HHLA2Q9UM44 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HHLA2Q9UM44 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms