Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NCDNQ9UBB6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NCDNQ9UBB6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NCDNQ9UBB6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 AC106739.1-201ENST00000617035 715 ntBASIC23.91■■□□□ 1.42
NCDNQ9UBB6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NCDNQ9UBB6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NCDNQ9UBB6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.9■■□□□ 1.42
NCDNQ9UBB6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.9■■□□□ 1.42
NCDNQ9UBB6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.9■■□□□ 1.42
NCDNQ9UBB6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NCDNQ9UBB6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.9■■□□□ 1.42
NCDNQ9UBB6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.89■■□□□ 1.42
NCDNQ9UBB6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
NCDNQ9UBB6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.89■■□□□ 1.41
NCDNQ9UBB6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.89■■□□□ 1.41
NCDNQ9UBB6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.89■■□□□ 1.41
NCDNQ9UBB6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NCDNQ9UBB6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NCDNQ9UBB6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 SHF-206ENST00000560471 2499 ntTSL 5 BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NCDNQ9UBB6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC23.87■■□□□ 1.41
NCDNQ9UBB6 MIR4281-201ENST00000580852 62 ntBASIC23.87■■□□□ 1.41
NCDNQ9UBB6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.87■■□□□ 1.41
NCDNQ9UBB6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NCDNQ9UBB6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NCDNQ9UBB6 AC139426.1-201ENST00000568218 2529 ntBASIC23.86■■□□□ 1.41
NCDNQ9UBB6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NCDNQ9UBB6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.86■■□□□ 1.41
NCDNQ9UBB6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
NCDNQ9UBB6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.86■■□□□ 1.41
NCDNQ9UBB6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.86■■□□□ 1.41
NCDNQ9UBB6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NCDNQ9UBB6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NCDNQ9UBB6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.85■■□□□ 1.41
NCDNQ9UBB6 AL512631.2-201ENST00000604634 923 ntBASIC23.85■■□□□ 1.41
NCDNQ9UBB6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NCDNQ9UBB6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.84■■□□□ 1.41
NCDNQ9UBB6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NCDNQ9UBB6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
NCDNQ9UBB6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NCDNQ9UBB6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.83■■□□□ 1.41
NCDNQ9UBB6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NCDNQ9UBB6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCDNQ9UBB6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NCDNQ9UBB6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.83■■□□□ 1.41
NCDNQ9UBB6 ST7-AS1-201ENST00000456775 1889 ntBASIC23.83■■□□□ 1.4
NCDNQ9UBB6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
NCDNQ9UBB6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCDNQ9UBB6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.82■■□□□ 1.4
NCDNQ9UBB6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NCDNQ9UBB6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NCDNQ9UBB6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC23.8■■□□□ 1.4
NCDNQ9UBB6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCDNQ9UBB6 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NCDNQ9UBB6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.79■■□□□ 1.4
NCDNQ9UBB6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NCDNQ9UBB6 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.79■■□□□ 1.4
NCDNQ9UBB6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
NCDNQ9UBB6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NCDNQ9UBB6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
NCDNQ9UBB6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCDNQ9UBB6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NCDNQ9UBB6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NCDNQ9UBB6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.78■■□□□ 1.4
NCDNQ9UBB6 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.78■■□□□ 1.4
NCDNQ9UBB6 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NCDNQ9UBB6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NCDNQ9UBB6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
NCDNQ9UBB6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NCDNQ9UBB6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms