Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRWD1Q9NSI6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.36■■□□□ 1.65
BRWD1Q9NSI6 KRT18P10-201ENST00000388836 1287 ntBASIC25.36■■□□□ 1.65
BRWD1Q9NSI6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.36■■□□□ 1.65
BRWD1Q9NSI6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
BRWD1Q9NSI6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.35■■□□□ 1.65
BRWD1Q9NSI6 MTDHP2-201ENST00000601468 714 ntBASIC25.34■■□□□ 1.65
BRWD1Q9NSI6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRWD1Q9NSI6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
BRWD1Q9NSI6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
BRWD1Q9NSI6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
BRWD1Q9NSI6 AC142381.2-201ENST00000566120 298 ntBASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
BRWD1Q9NSI6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRWD1Q9NSI6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.31■■□□□ 1.64
BRWD1Q9NSI6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRWD1Q9NSI6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
BRWD1Q9NSI6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.31■■□□□ 1.64
BRWD1Q9NSI6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
BRWD1Q9NSI6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.3■■□□□ 1.64
BRWD1Q9NSI6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
BRWD1Q9NSI6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
BRWD1Q9NSI6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
BRWD1Q9NSI6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
BRWD1Q9NSI6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
BRWD1Q9NSI6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
BRWD1Q9NSI6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.29■■□□□ 1.64
BRWD1Q9NSI6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
BRWD1Q9NSI6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
BRWD1Q9NSI6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
BRWD1Q9NSI6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BRWD1Q9NSI6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
BRWD1Q9NSI6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.27■■□□□ 1.64
BRWD1Q9NSI6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
BRWD1Q9NSI6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 AC087623.3-201ENST00000607047 1098 ntBASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
BRWD1Q9NSI6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
BRWD1Q9NSI6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.25■■□□□ 1.63
BRWD1Q9NSI6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
BRWD1Q9NSI6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
BRWD1Q9NSI6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.24■■□□□ 1.63
BRWD1Q9NSI6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
BRWD1Q9NSI6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
BRWD1Q9NSI6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.24■■□□□ 1.63
BRWD1Q9NSI6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.23■■□□□ 1.63
BRWD1Q9NSI6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.23■■□□□ 1.63
BRWD1Q9NSI6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
BRWD1Q9NSI6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
BRWD1Q9NSI6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
BRWD1Q9NSI6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.23■■□□□ 1.63
BRWD1Q9NSI6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
BRWD1Q9NSI6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.22■■□□□ 1.63
BRWD1Q9NSI6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
BRWD1Q9NSI6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.2■■□□□ 1.63
BRWD1Q9NSI6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
BRWD1Q9NSI6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
BRWD1Q9NSI6 PBX2P1-201ENST00000493219 1291 ntBASIC25.19■■□□□ 1.62
BRWD1Q9NSI6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.19■■□□□ 1.62
BRWD1Q9NSI6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
BRWD1Q9NSI6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
BRWD1Q9NSI6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.19■■□□□ 1.62
BRWD1Q9NSI6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
BRWD1Q9NSI6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
BRWD1Q9NSI6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
BRWD1Q9NSI6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.18■■□□□ 1.62
BRWD1Q9NSI6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
BRWD1Q9NSI6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
BRWD1Q9NSI6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
BRWD1Q9NSI6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
BRWD1Q9NSI6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
BRWD1Q9NSI6 AL162430.1-201ENST00000480705 870 ntBASIC25.17■■□□□ 1.62
BRWD1Q9NSI6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms