Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CSNK1D-217ENST00000581241 6094 ntTSL 214.42□□□□□ -0.12e-11■■■■■ 38.1
XRN2Q9H0D6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.192e-11■■■■■ 38.1
XRN2Q9H0D6 ANKMY1-213ENST00000418505 568 ntTSL 427.35■■□□□ 1.972e-6■■■■■ 38.1
XRN2Q9H0D6 ANKMY1-214ENST00000418708 945 ntTSL 324.5■■□□□ 1.512e-6■■■■■ 38.1
XRN2Q9H0D6 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.642e-7■■■■■ 38.1
XRN2Q9H0D6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.584e-7■■■■■ 37.9
XRN2Q9H0D6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.87■■□□□ 1.732e-12■■■■■ 37.9
XRN2Q9H0D6 GNAZ-202ENST00000492538 652 ntTSL 425.63■■□□□ 1.691e-6■■■■■ 37.9
XRN2Q9H0D6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.51■■□□□ 1.352e-12■■■■■ 37.9
XRN2Q9H0D6 EBF4-203ENST00000449079 2788 ntTSL 221.48■■□□□ 1.031e-6■■■■■ 37.9
XRN2Q9H0D6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.771e-6■■■■■ 37.9
XRN2Q9H0D6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.74■□□□□ 0.751e-9■■■■■ 37.9
XRN2Q9H0D6 EBF4-201ENST00000342725 2705 ntTSL 519.13■□□□□ 0.651e-6■■■■■ 37.9
XRN2Q9H0D6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.571e-6■■■■■ 37.9
XRN2Q9H0D6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.224e-6■■■■■ 37.9
XRN2Q9H0D6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.194e-6■■■■■ 37.9
XRN2Q9H0D6 BRD1-203ENST00000404760 4550 ntTSL 2 BASIC12.09□□□□□ -0.475e-6■■■■■ 37.9
XRN2Q9H0D6 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.884e-6■■■■■ 37.9
XRN2Q9H0D6 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.024e-6■■■■■ 37.9
XRN2Q9H0D6 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.11□□□□□ -1.271e-8■■■■■ 37.9
XRN2Q9H0D6 DTNA-215ENST00000588771 593 ntTSL 46.66□□□□□ -1.341e-8■■■■■ 37.9
XRN2Q9H0D6 PLCB1-220ENST00000630757 857 ntTSL 36.45□□□□□ -1.382e-12■■■■■ 37.9
XRN2Q9H0D6 DTNA-213ENST00000588506 528 ntTSL 45.78□□□□□ -1.481e-8■■■■■ 37.9
XRN2Q9H0D6 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.17□□□□□ -1.581e-8■■■■■ 37.9
XRN2Q9H0D6 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.96□□□□□ -1.621e-8■■■■■ 37.9
XRN2Q9H0D6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.59□□□□□ -1.844e-6■■■■■ 37.9
XRN2Q9H0D6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.944e-6■■■■■ 37.9
XRN2Q9H0D6 PLCB1-229ENST00000637204 100 ntTSL 52.8□□□□□ -1.962e-12■■■■■ 37.9
XRN2Q9H0D6 OAZ1-203ENST00000586054 2832 nt20.85■□□□□ 0.936e-9■■■■■ 37.7
XRN2Q9H0D6 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.422e-9■■■■■ 37.7
XRN2Q9H0D6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.124e-8■■■■■ 37.7
XRN2Q9H0D6 ANKRD28-203ENST00000439830 592 ntTSL 530.43■■■□□ 2.469e-9■■■■■ 37.7
XRN2Q9H0D6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.039e-9■■■■■ 37.7
XRN2Q9H0D6 AGO2-210ENST00000524328 316 ntTSL 514.07□□□□□ -0.163e-6■■■■■ 37.6
XRN2Q9H0D6 MKRN1-214ENST00000495305 1390 ntTSL 233.46■■■□□ 2.952e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-212ENST00000481705 636 ntTSL 531.3■■■□□ 2.62e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-216ENST00000498535 607 ntTSL 230.89■■■□□ 2.542e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.182e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-215ENST00000496169 1625 ntTSL 227.45■■□□□ 1.982e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-207ENST00000473444 720 ntTSL 322.12■■□□□ 1.132e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-206ENST00000471104 1053 ntTSL 521.97■■□□□ 1.112e-9■■■■■ 37.6
XRN2Q9H0D6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.052e-9■■■■■ 37.6
XRN2Q9H0D6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.27■□□□□ 0.992e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.11■□□□□ 0.972e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-206ENST00000507899 741 ntTSL 519.48■□□□□ 0.712e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-213ENST00000515679 591 ntTSL 319.48■□□□□ 0.712e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-208ENST00000510802 532 ntTSL 518.33■□□□□ 0.522e-9■■■■■ 37.6
XRN2Q9H0D6 ANO9-208ENST00000534161 2158 ntTSL 217.74■□□□□ 0.432e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.372e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-205ENST00000507700 2306 ntTSL 1 (best)16.07■□□□□ 0.162e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.112e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-208ENST00000483409 570 ntTSL 415.63■□□□□ 0.092e-9■■■■■ 37.6
XRN2Q9H0D6 ANO9-205ENST00000526142 2868 ntTSL 215.46■□□□□ 0.072e-9■■■■■ 37.6
XRN2Q9H0D6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.012e-9■■■■■ 37.6
XRN2Q9H0D6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.052e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.22e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-209ENST00000475010 3467 ntTSL 213.78□□□□□ -0.22e-9■■■■■ 37.6
XRN2Q9H0D6 SETD5-227ENST00000492939 634 ntTSL 213.49□□□□□ -0.252e-9■■■■■ 37.6
XRN2Q9H0D6 SETD5-213ENST00000459941 1074 ntTSL 513.2□□□□□ -0.32e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-209ENST00000511441 2951 ntTSL 1 (best)13□□□□□ -0.332e-9■■■■■ 37.6
XRN2Q9H0D6 MKRN1-210ENST00000475180 560 ntTSL 512.99□□□□□ -0.332e-9■■■■■ 37.6
XRN2Q9H0D6 SETD5-224ENST00000486465 886 ntTSL 212.94□□□□□ -0.342e-9■■■■■ 37.6
XRN2Q9H0D6 SETD5-223ENST00000479538 427 ntTSL 312.94□□□□□ -0.342e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-204ENST00000504837 679 ntTSL 39.98□□□□□ -0.812e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC9.47□□□□□ -0.892e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-210ENST00000489567 1893 ntTSL 3 BASIC9.09□□□□□ -0.952e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC8.73□□□□□ -1.012e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.22e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-203ENST00000503196 595 ntTSL 45.45□□□□□ -1.542e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.84□□□□□ -1.632e-9■■■■■ 37.6
XRN2Q9H0D6 SSR1-209ENST00000488834 585 ntTSL 44.37□□□□□ -1.712e-9■■■■■ 37.6
XRN2Q9H0D6 FBXL5-207ENST00000509314 596 ntTSL 44.28□□□□□ -1.722e-9■■■■■ 37.6
XRN2Q9H0D6 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.1■□□□□ 0.172e-7■■■■■ 37.6
XRN2Q9H0D6 STAG1-203ENST00000434713 5064 ntTSL 5 BASIC12.61□□□□□ -0.392e-7■■■■■ 37.6
XRN2Q9H0D6 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC10.72□□□□□ -0.692e-7■■■■■ 37.6
XRN2Q9H0D6 STAG1-207ENST00000483235 5206 ntTSL 1 (best)10.63□□□□□ -0.712e-7■■■■■ 37.6
XRN2Q9H0D6 STAG1-208ENST00000487065 2914 ntTSL 1 (best)8.92□□□□□ -0.982e-7■■■■■ 37.6
XRN2Q9H0D6 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.132e-7■■■■■ 37.6
XRN2Q9H0D6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.08□□□□□ -1.282e-7■■■■■ 37.6
XRN2Q9H0D6 MIR6758-201ENST00000620653 63 ntBASIC5.99□□□□□ -1.453e-36■■■■■ 37.5
XRN2Q9H0D6 PRKAR1B-205ENST00000414568 752 ntTSL 519.13■□□□□ 0.655e-6■■■■■ 37.4
XRN2Q9H0D6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.368e-18■■■■■ 37.3
XRN2Q9H0D6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.55■■□□□ 1.042e-6■■■■■ 37.3
XRN2Q9H0D6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.978e-18■■■■■ 37.3
XRN2Q9H0D6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.381e-7■■■■■ 37.3
XRN2Q9H0D6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.288e-18■■■■■ 37.3
XRN2Q9H0D6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.15□□□□□ -0.141e-7■■■■■ 37.3
XRN2Q9H0D6 ONECUT1-203ENST00000561401 583 ntTSL 38.15□□□□□ -1.11e-11■■■■■ 37.3
XRN2Q9H0D6 COQ8A-204ENST00000476488 264 ntTSL 316.16■□□□□ 0.184e-14■■■■■ 37
XRN2Q9H0D6 MVD-214ENST00000567064 758 ntTSL 321.81■■□□□ 1.085e-7■■■■■ 37
XRN2Q9H0D6 MVD-217ENST00000569177 870 ntTSL 520.12■□□□□ 0.815e-7■■■■■ 37
XRN2Q9H0D6 MVD-215ENST00000568133 853 ntTSL 319.29■□□□□ 0.685e-7■■■■■ 37
XRN2Q9H0D6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.984e-12■■■■■ 37
XRN2Q9H0D6 RAN-205ENST00000477395 762 ntTSL 519.73■□□□□ 0.754e-12■■■■■ 37
XRN2Q9H0D6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.294e-12■■■■■ 37
XRN2Q9H0D6 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.71■□□□□ 0.274e-12■■■■■ 37
XRN2Q9H0D6 RAN-208ENST00000537745 1065 ntTSL 1 (best)13.23□□□□□ -0.294e-12■■■■■ 37
XRN2Q9H0D6 RAN-207ENST00000536606 572 ntTSL 312.84□□□□□ -0.354e-12■■■■■ 37
XRN2Q9H0D6 RAN-204ENST00000464211 562 ntTSL 511.66□□□□□ -0.544e-12■■■■■ 37
XRN2Q9H0D6 RAN-201ENST00000392367 780 ntTSL 5 BASIC10.73□□□□□ -0.694e-12■■■■■ 37
Retrieved 100 of 21,068 protein–RNA pairs in 248.1 ms