RNA–Protein interactions for RNA: ENST00000475010.5

MKRN1-209, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 3,467 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-209ENST00000475010 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
MKRN1-209ENST00000475010 CCDC180Q9P1Z9 1646 aa24.74■■□□□ 1.55
MKRN1-209ENST00000475010 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
MKRN1-209ENST00000475010 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
MKRN1-209ENST00000475010 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
MKRN1-209ENST00000475010 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
MKRN1-209ENST00000475010 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
MKRN1-209ENST00000475010 PELP1Q8IZL8 1130 aaKnown RBP23.23■■□□□ 1.31
MKRN1-209ENST00000475010 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
MKRN1-209ENST00000475010 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
MKRN1-209ENST00000475010 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
MKRN1-209ENST00000475010 ABCC9O60706 1549 aa23.09■■□□□ 1.29
MKRN1-209ENST00000475010 HRCP23327 699 aa23.09■■□□□ 1.29
MKRN1-209ENST00000475010 NACADO15069 1562 aa22.94■■□□□ 1.26
MKRN1-209ENST00000475010 RSF1Q96T23 1441 aaPredicted RBP22.83■■□□□ 1.24
MKRN1-209ENST00000475010 RB1CC1Q8TDY2 1594 aa22.61■■□□□ 1.21
MKRN1-209ENST00000475010 CECR2Q9BXF3 1484 aa22.58■■□□□ 1.2
MKRN1-209ENST00000475010 MYT1Q01538 1121 aa22.57■■□□□ 1.2
MKRN1-209ENST00000475010 MROH2BQ7Z745 1585 aa22.48■■□□□ 1.19
MKRN1-209ENST00000475010 LOC105371045A0A1W2PR82 267 aa22.46■■□□□ 1.19
MKRN1-209ENST00000475010 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
MKRN1-209ENST00000475010 WIZO95785 1651 aa22.35■■□□□ 1.17
MKRN1-209ENST00000475010 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
MKRN1-209ENST00000475010 PPARGC1BQ86YN6 1023 aaKnown RBP22.27■■□□□ 1.16
MKRN1-209ENST00000475010 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
MKRN1-209ENST00000475010 UNC13AQ9UPW8 1703 aa22.19■■□□□ 1.14
MKRN1-209ENST00000475010 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
MKRN1-209ENST00000475010 SMARCA4P51532 1647 aa22.1■■□□□ 1.13
MKRN1-209ENST00000475010 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
MKRN1-209ENST00000475010 TOP2AP11388 1531 aaKnown RBP22.03■■□□□ 1.12
MKRN1-209ENST00000475010 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
MKRN1-209ENST00000475010 EHMT2Q96KQ7 1210 aa21.96■■□□□ 1.11
MKRN1-209ENST00000475010 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
MKRN1-209ENST00000475010 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
MKRN1-209ENST00000475010 CCDC88BA6NC98 1476 aa21.91■■□□□ 1.1
MKRN1-209ENST00000475010 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
MKRN1-209ENST00000475010 SMARCA2P51531 1590 aa21.88■■□□□ 1.09
MKRN1-209ENST00000475010 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
MKRN1-209ENST00000475010 PEG3Q9GZU2 1588 aa21.68■■□□□ 1.06
MKRN1-209ENST00000475010 ZEB1P37275 1124 aaPredicted RBP21.67■■□□□ 1.06
MKRN1-209ENST00000475010 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
MKRN1-209ENST00000475010 BAZ1BQ9UIG0 1483 aaKnown RBP21.55■■□□□ 1.04
MKRN1-209ENST00000475010 SOGA1O94964 1423 aa21.53■■□□□ 1.04
MKRN1-209ENST00000475010 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
MKRN1-209ENST00000475010 EEA1Q15075 1411 aa21.46■■□□□ 1.03
MKRN1-209ENST00000475010 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
MKRN1-209ENST00000475010 RUSC2Q8N2Y8 1516 aa21.42■■□□□ 1.02
MKRN1-209ENST00000475010 TTBK1Q5TCY1 1321 aaPredicted RBP21.41■■□□□ 1.02
MKRN1-209ENST00000475010 ACIN1Q9UKV3 1341 aaKnown RBP21.4■■□□□ 1.02
MKRN1-209ENST00000475010 CEP162Q5TB80 1403 aa21.36■■□□□ 1.01
MKRN1-209ENST00000475010 UBTFP17480 764 aaKnown RBP21.36■■□□□ 1.01
MKRN1-209ENST00000475010 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
MKRN1-209ENST00000475010 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
MKRN1-209ENST00000475010 GOLGA3Q08378 1498 aa21.29■■□□□ 1
MKRN1-209ENST00000475010 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
MKRN1-209ENST00000475010 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
MKRN1-209ENST00000475010 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
MKRN1-209ENST00000475010 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
MKRN1-209ENST00000475010 KIF21BO75037 1637 aa21.13■□□□□ 0.97
MKRN1-209ENST00000475010 GTF3C3Q9Y5Q9 886 aa21.13■□□□□ 0.97
MKRN1-209ENST00000475010 TOP2BQ02880 1626 aa21.12■□□□□ 0.97
MKRN1-209ENST00000475010 CENPBP07199 599 aaPredicted RBP21.09■□□□□ 0.97
MKRN1-209ENST00000475010 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
MKRN1-209ENST00000475010 BIVM-ERCC5R4GMW8 1640 aa21.04■□□□□ 0.96
MKRN1-209ENST00000475010 CCER1Q8TC90 406 aaPredicted RBP21.03■□□□□ 0.96
MKRN1-209ENST00000475010 CLIP1P30622 1438 aa21.03■□□□□ 0.96
MKRN1-209ENST00000475010 RAPGEF2Q9Y4G8 1499 aa21.03■□□□□ 0.96
MKRN1-209ENST00000475010 CFTRP13569 1480 aa20.98■□□□□ 0.95
MKRN1-209ENST00000475010 RANGAP1P46060 587 aaPredicted RBP20.96■□□□□ 0.95
MKRN1-209ENST00000475010 CUX1P39880 1505 aa20.95■□□□□ 0.94
MKRN1-209ENST00000475010 VPS8Q8N3P4 1428 aa20.91■□□□□ 0.94
MKRN1-209ENST00000475010 APLP2Q06481 763 aa20.88■□□□□ 0.93
MKRN1-209ENST00000475010 KIF27Q86VH2 1401 aa20.86■□□□□ 0.93
MKRN1-209ENST00000475010 PRXQ9BXM0 1461 aa20.85■□□□□ 0.93
MKRN1-209ENST00000475010 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
MKRN1-209ENST00000475010 CADPSQ9ULU8 1353 aa20.8■□□□□ 0.92
MKRN1-209ENST00000475010 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
MKRN1-209ENST00000475010 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
MKRN1-209ENST00000475010 HNRNPUL2Q1KMD3 747 aaKnown RBP20.73■□□□□ 0.91
MKRN1-209ENST00000475010 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.91
MKRN1-209ENST00000475010 BCL11AQ9H165 835 aa20.7■□□□□ 0.9
MKRN1-209ENST00000475010 CUX2O14529 1486 aa20.69■□□□□ 0.9
MKRN1-209ENST00000475010 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
MKRN1-209ENST00000475010 FGD5Q6ZNL6 1462 aa20.64■□□□□ 0.89
MKRN1-209ENST00000475010 IGF1RP08069 1367 aa20.6■□□□□ 0.89
MKRN1-209ENST00000475010 FANCD2Q9BXW9 1451 aa20.6■□□□□ 0.89
MKRN1-209ENST00000475010 ARHGAP35Q9NRY4 1499 aa20.55■□□□□ 0.88
MKRN1-209ENST00000475010 CARMIL1Q5VZK9 1371 aa20.55■□□□□ 0.88
MKRN1-209ENST00000475010 KANK4Q5T7N3 995 aaPredicted RBP20.53■□□□□ 0.88
MKRN1-209ENST00000475010 NESP48681 1621 aa20.49■□□□□ 0.87
MKRN1-209ENST00000475010 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
MKRN1-209ENST00000475010 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
MKRN1-209ENST00000475010 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
MKRN1-209ENST00000475010 RAD54L2Q9Y4B4 1467 aa20.44■□□□□ 0.86
MKRN1-209ENST00000475010 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
MKRN1-209ENST00000475010 ABCA10Q8WWZ4 1543 aa20.39■□□□□ 0.85
MKRN1-209ENST00000475010 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
MKRN1-209ENST00000475010 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
MKRN1-209ENST00000475010 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
MKRN1-209ENST00000475010 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms