RNA–Protein interactions for RNA: ENST00000449079.7

EBF4-203, Transcript of early B cell factor 4, humanhuman

TSL 2

Gene EBF4, Length 2,788 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4-203ENST00000449079 NISCHQ9Y2I1 1504 aa45.32■■■■■ 4.85
EBF4-203ENST00000449079 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
EBF4-203ENST00000449079 DCAF8L2P0C7V8 631 aa38.69■■■■□ 3.78
EBF4-203ENST00000449079 CCDC180Q9P1Z9 1646 aa38.55■■■■□ 3.76
EBF4-203ENST00000449079 ZCCHC6Q5VYS8 1495 aaKnown RBP38.11■■■■□ 3.69
EBF4-203ENST00000449079 SUPT5HO00267 1087 aaKnown RBP37.64■■■■□ 3.62
EBF4-203ENST00000449079 ABCC9O60706 1549 aa37.23■■■■□ 3.55
EBF4-203ENST00000449079 HRCP23327 699 aa36.79■■■■□ 3.48
EBF4-203ENST00000449079 DCAF1Q9Y4B6 1507 aa36.77■■■■□ 3.48
EBF4-203ENST00000449079 SCRIBQ14160 1630 aa36.64■■■■□ 3.46
EBF4-203ENST00000449079 PPARGC1BQ86YN6 1023 aaKnown RBP36.19■■■■□ 3.38
EBF4-203ENST00000449079 PELP1Q8IZL8 1130 aaKnown RBP36■■■■□ 3.35
EBF4-203ENST00000449079 PCGF6Q9BYE7 350 aa35.98■■■■□ 3.35
EBF4-203ENST00000449079 NACADO15069 1562 aa35.94■■■■□ 3.34
EBF4-203ENST00000449079 MYO15BQ96JP2 1530 aa35.91■■■■□ 3.34
EBF4-203ENST00000449079 CHIC1Q5VXU3 224 aa35.85■■■■□ 3.33
EBF4-203ENST00000449079 CECR2Q9BXF3 1484 aa35.78■■■■□ 3.32
EBF4-203ENST00000449079 RSF1Q96T23 1441 aaPredicted RBP35.71■■■■□ 3.31
EBF4-203ENST00000449079 PABPN1Q86U42 306 aaKnown RBP eCLIP35.68■■■■□ 3.3
EBF4-203ENST00000449079 RB1CC1Q8TDY2 1594 aa35.64■■■■□ 3.3
EBF4-203ENST00000449079 MROH2BQ7Z745 1585 aa35.42■■■■□ 3.26
EBF4-203ENST00000449079 UNC13AQ9UPW8 1703 aa35.28■■■■□ 3.24
EBF4-203ENST00000449079 WIZO95785 1651 aa35.21■■■■□ 3.23
EBF4-203ENST00000449079 LOC105371045A0A1W2PR82 267 aa35.13■■■■□ 3.21
EBF4-203ENST00000449079 SCAF1Q9H7N4 1312 aaKnown RBP35.11■■■■□ 3.21
EBF4-203ENST00000449079 EHMT2Q96KQ7 1210 aa35.05■■■■□ 3.2
EBF4-203ENST00000449079 FAM9AQ8IZU1 332 aaPredicted RBP34.96■■■■□ 3.19
EBF4-203ENST00000449079 BICRAQ9NZM4 1560 aa34.9■■■■□ 3.18
EBF4-203ENST00000449079 TRIM41Q8WV44 630 aa34.81■■■■□ 3.16
EBF4-203ENST00000449079 BAZ1AQ9NRL2 1556 aaPredicted RBP34.77■■■■□ 3.16
EBF4-203ENST00000449079 SMARCA4P51532 1647 aa34.68■■■■□ 3.14
EBF4-203ENST00000449079 MYT1Q01538 1121 aa34.66■■■■□ 3.14
EBF4-203ENST00000449079 TRIM26Q12899 539 aaPredicted RBP34.55■■■■□ 3.12
EBF4-203ENST00000449079 CCDC88BA6NC98 1476 aa34.42■■■■□ 3.1
EBF4-203ENST00000449079 ZEB1P37275 1124 aaPredicted RBP34.34■■■■□ 3.09
EBF4-203ENST00000449079 TOP2AP11388 1531 aaKnown RBP34.33■■■■□ 3.09
EBF4-203ENST00000449079 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
EBF4-203ENST00000449079 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
EBF4-203ENST00000449079 ATAD2BQ9ULI0 1458 aa34.08■■■■□ 3.05
EBF4-203ENST00000449079 ACIN1Q9UKV3 1341 aaKnown RBP34.07■■■■□ 3.04
EBF4-203ENST00000449079 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
EBF4-203ENST00000449079 NEUROD1Q13562 356 aa34.02■■■■□ 3.04
EBF4-203ENST00000449079 BAZ1BQ9UIG0 1483 aaKnown RBP33.96■■■■□ 3.03
EBF4-203ENST00000449079 GTF3C3Q9Y5Q9 886 aa33.89■■■■□ 3.02
EBF4-203ENST00000449079 PEG3Q9GZU2 1588 aa33.79■■■■□ 3
EBF4-203ENST00000449079 SOGA1O94964 1423 aa33.78■■■■□ 3
EBF4-203ENST00000449079 RUSC2Q8N2Y8 1516 aa33.76■■■□□ 2.99
EBF4-203ENST00000449079 TTBK1Q5TCY1 1321 aaPredicted RBP33.6■■■□□ 2.97
EBF4-203ENST00000449079 CENPBP07199 599 aaPredicted RBP33.56■■■□□ 2.96
EBF4-203ENST00000449079 WRNQ14191 1432 aaPredicted RBP eCLIP33.54■■■□□ 2.96
EBF4-203ENST00000449079 SYNJ1O43426 1573 aa33.47■■■□□ 2.95
EBF4-203ENST00000449079 RANGAP1P46060 587 aaPredicted RBP33.46■■■□□ 2.95
EBF4-203ENST00000449079 NCAPD3P42695 1498 aa33.4■■■□□ 2.94
EBF4-203ENST00000449079 UBTFP17480 764 aaKnown RBP33.38■■■□□ 2.93
EBF4-203ENST00000449079 DNAJC5BQ9UF47 199 aa33.38■■■□□ 2.93
EBF4-203ENST00000449079 CSRNP3Q8WYN3 585 aa33.35■■■□□ 2.93
EBF4-203ENST00000449079 DIEXFQ68CQ4 756 aaKnown RBP33.31■■■□□ 2.92
EBF4-203ENST00000449079 CC2D2AQ9P2K1 1620 aa33.25■■■□□ 2.91
EBF4-203ENST00000449079 HMGXB3Q12766 1538 aa33.2■■■□□ 2.9
EBF4-203ENST00000449079 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.19■■■□□ 2.9
EBF4-203ENST00000449079 CCER1Q8TC90 406 aaPredicted RBP33.11■■■□□ 2.89
EBF4-203ENST00000449079 CEP162Q5TB80 1403 aa33.04■■■□□ 2.88
EBF4-203ENST00000449079 CFTRP13569 1480 aa32.97■■■□□ 2.87
EBF4-203ENST00000449079 CUX1P39880 1505 aa32.97■■■□□ 2.87
EBF4-203ENST00000449079 YTHDC1Q96MU7 727 aaKnown RBP32.96■■■□□ 2.87
EBF4-203ENST00000449079 NESP48681 1621 aa32.95■■■□□ 2.87
EBF4-203ENST00000449079 RAPGEF2Q9Y4G8 1499 aa32.9■■■□□ 2.86
EBF4-203ENST00000449079 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
EBF4-203ENST00000449079 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
EBF4-203ENST00000449079 TNIKQ9UKE5 1360 aa32.85■■■□□ 2.85
EBF4-203ENST00000449079 GOLGA3Q08378 1498 aa32.83■■■□□ 2.85
EBF4-203ENST00000449079 EEA1Q15075 1411 aa32.8■■■□□ 2.84
EBF4-203ENST00000449079 CEP164Q9UPV0 1460 aa32.69■■■□□ 2.82
EBF4-203ENST00000449079 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
EBF4-203ENST00000449079 BCL11AQ9H165 835 aa32.6■■■□□ 2.81
EBF4-203ENST00000449079 FANCD2Q9BXW9 1451 aa32.6■■■□□ 2.81
EBF4-203ENST00000449079 CLIP1P30622 1438 aa32.59■■■□□ 2.81
EBF4-203ENST00000449079 CUX2O14529 1486 aa32.56■■■□□ 2.8
EBF4-203ENST00000449079 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
EBF4-203ENST00000449079 KIF21BO75037 1637 aa32.52■■■□□ 2.8
EBF4-203ENST00000449079 RAD54L2Q9Y4B4 1467 aa32.52■■■□□ 2.8
EBF4-203ENST00000449079 ZNF316A6NFI3 1004 aaPredicted RBP32.5■■■□□ 2.79
EBF4-203ENST00000449079 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
EBF4-203ENST00000449079 MIER1Q8N108 512 aa32.44■■■□□ 2.78
EBF4-203ENST00000449079 PRXQ9BXM0 1461 aa32.4■■■□□ 2.78
EBF4-203ENST00000449079 PRDM2Q13029 1718 aa32.36■■■□□ 2.77
EBF4-203ENST00000449079 P3H3Q8IVL6 736 aa32.36■■■□□ 2.77
EBF4-203ENST00000449079 IGF1RP08069 1367 aa32.36■■■□□ 2.77
EBF4-203ENST00000449079 ANP32EQ9BTT0 268 aa32.33■■■□□ 2.77
EBF4-203ENST00000449079 HNRNPUL2Q1KMD3 747 aaKnown RBP32.3■■■□□ 2.76
EBF4-203ENST00000449079 TOPBP1Q92547 1522 aa32.26■■■□□ 2.75
EBF4-203ENST00000449079 POLA1P09884 1462 aaPredicted RBP32.25■■■□□ 2.75
EBF4-203ENST00000449079 TDRD9Q8NDG6 1382 aaKnown RBP32.24■■■□□ 2.75
EBF4-203ENST00000449079 URB2Q14146 1524 aaKnown RBP32.22■■■□□ 2.75
EBF4-203ENST00000449079 VPS8Q8N3P4 1428 aa32.21■■■□□ 2.75
EBF4-203ENST00000449079 APLP2Q06481 763 aa32.2■■■□□ 2.75
EBF4-203ENST00000449079 KANK4Q5T7N3 995 aaPredicted RBP32.2■■■□□ 2.75
EBF4-203ENST00000449079 CARMIL1Q5VZK9 1371 aa32.2■■■□□ 2.75
EBF4-203ENST00000449079 ARAP1Q96P48 1450 aa32.19■■■□□ 2.74
EBF4-203ENST00000449079 ATP1B4Q9UN42 357 aaPredicted RBP32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms