RNA–Protein interactions for RNA: ENST00000342725.9

EBF4-201, Transcript of early B cell factor 4, humanhuman

TSL 5

Gene EBF4, Length 2,705 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4-201ENST00000342725 NISCHQ9Y2I1 1504 aa39.99■■■■□ 3.99
EBF4-201ENST00000342725 CCDC180Q9P1Z9 1646 aa34.5■■■■□ 3.11
EBF4-201ENST00000342725 SHROOM4Q9ULL8 1493 aa34.07■■■■□ 3.04
EBF4-201ENST00000342725 DCAF8L2P0C7V8 631 aa33.95■■■■□ 3.03
EBF4-201ENST00000342725 ZCCHC6Q5VYS8 1495 aaKnown RBP33.77■■■■□ 3
EBF4-201ENST00000342725 SUPT5HO00267 1087 aaKnown RBP33.52■■■□□ 2.96
EBF4-201ENST00000342725 ABCC9O60706 1549 aa33.45■■■□□ 2.94
EBF4-201ENST00000342725 CHIC1Q5VXU3 224 aa32.75■■■□□ 2.83
EBF4-201ENST00000342725 DCAF1Q9Y4B6 1507 aa32.73■■■□□ 2.83
EBF4-201ENST00000342725 MYO15BQ96JP2 1530 aa32.71■■■□□ 2.83
EBF4-201ENST00000342725 SCRIBQ14160 1630 aa32.35■■■□□ 2.77
EBF4-201ENST00000342725 NACADO15069 1562 aa32.27■■■□□ 2.76
EBF4-201ENST00000342725 HRCP23327 699 aa32.18■■■□□ 2.74
EBF4-201ENST00000342725 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
EBF4-201ENST00000342725 PCGF6Q9BYE7 350 aa31.96■■■□□ 2.71
EBF4-201ENST00000342725 PABPN1Q86U42 306 aaKnown RBP eCLIP31.8■■■□□ 2.68
EBF4-201ENST00000342725 LOC105371045A0A1W2PR82 267 aa31.75■■■□□ 2.67
EBF4-201ENST00000342725 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
EBF4-201ENST00000342725 UNC13AQ9UPW8 1703 aa31.56■■■□□ 2.64
EBF4-201ENST00000342725 PPARGC1BQ86YN6 1023 aaKnown RBP31.41■■■□□ 2.62
EBF4-201ENST00000342725 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
EBF4-201ENST00000342725 TRIM26Q12899 539 aaPredicted RBP31.33■■■□□ 2.61
EBF4-201ENST00000342725 BICRAQ9NZM4 1560 aa31.27■■■□□ 2.6
EBF4-201ENST00000342725 TRIM41Q8WV44 630 aa31.23■■■□□ 2.59
EBF4-201ENST00000342725 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
EBF4-201ENST00000342725 FAM9AQ8IZU1 332 aaPredicted RBP30.94■■■□□ 2.54
EBF4-201ENST00000342725 WIZO95785 1651 aa30.86■■■□□ 2.53
EBF4-201ENST00000342725 BAZ1AQ9NRL2 1556 aaPredicted RBP30.79■■■□□ 2.52
EBF4-201ENST00000342725 ZEB1P37275 1124 aaPredicted RBP30.78■■■□□ 2.52
EBF4-201ENST00000342725 SMARCA4P51532 1647 aa30.72■■■□□ 2.51
EBF4-201ENST00000342725 EHMT2Q96KQ7 1210 aa30.64■■■□□ 2.5
EBF4-201ENST00000342725 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
EBF4-201ENST00000342725 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
EBF4-201ENST00000342725 ATAD2BQ9ULI0 1458 aa30.31■■■□□ 2.44
EBF4-201ENST00000342725 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
EBF4-201ENST00000342725 ABCC8Q09428 1581 aa30.21■■■□□ 2.43
EBF4-201ENST00000342725 SMARCA2P51531 1590 aa30.2■■■□□ 2.43
EBF4-201ENST00000342725 BAZ1BQ9UIG0 1483 aaKnown RBP30.18■■■□□ 2.42
EBF4-201ENST00000342725 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
EBF4-201ENST00000342725 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
EBF4-201ENST00000342725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30■■■□□ 2.39
EBF4-201ENST00000342725 CC2D2AQ9P2K1 1620 aa29.99■■■□□ 2.39
EBF4-201ENST00000342725 CEP162Q5TB80 1403 aa29.98■■■□□ 2.39
EBF4-201ENST00000342725 SOGA1O94964 1423 aa29.97■■■□□ 2.39
EBF4-201ENST00000342725 CCER1Q8TC90 406 aaPredicted RBP29.95■■■□□ 2.39
EBF4-201ENST00000342725 TNIKQ9UKE5 1360 aa29.92■■■□□ 2.38
EBF4-201ENST00000342725 EEA1Q15075 1411 aa29.92■■■□□ 2.38
EBF4-201ENST00000342725 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
EBF4-201ENST00000342725 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
EBF4-201ENST00000342725 CSRNP3Q8WYN3 585 aa29.82■■■□□ 2.36
EBF4-201ENST00000342725 RUSC2Q8N2Y8 1516 aa29.8■■■□□ 2.36
EBF4-201ENST00000342725 SCAF1Q9H7N4 1312 aaKnown RBP29.77■■■□□ 2.36
EBF4-201ENST00000342725 TTBK1Q5TCY1 1321 aaPredicted RBP29.74■■■□□ 2.35
EBF4-201ENST00000342725 HMGXB3Q12766 1538 aa29.73■■■□□ 2.35
EBF4-201ENST00000342725 GOLGA3Q08378 1498 aa29.71■■■□□ 2.35
EBF4-201ENST00000342725 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
EBF4-201ENST00000342725 SYNJ1O43426 1573 aa29.55■■■□□ 2.32
EBF4-201ENST00000342725 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
EBF4-201ENST00000342725 DIEXFQ68CQ4 756 aaKnown RBP29.51■■■□□ 2.31
EBF4-201ENST00000342725 KIF21BO75037 1637 aa29.51■■■□□ 2.31
EBF4-201ENST00000342725 PELP1Q8IZL8 1130 aaKnown RBP29.49■■■□□ 2.31
EBF4-201ENST00000342725 ACIN1Q9UKV3 1341 aaKnown RBP29.44■■■□□ 2.3
EBF4-201ENST00000342725 CLIP1P30622 1438 aa29.37■■■□□ 2.29
EBF4-201ENST00000342725 NESP48681 1621 aa29.36■■■□□ 2.29
EBF4-201ENST00000342725 NEUROD1Q13562 356 aa29.35■■■□□ 2.29
EBF4-201ENST00000342725 CADPSQ9ULU8 1353 aa29.31■■■□□ 2.28
EBF4-201ENST00000342725 CFTRP13569 1480 aa29.31■■■□□ 2.28
EBF4-201ENST00000342725 VPS8Q8N3P4 1428 aa29.29■■■□□ 2.28
EBF4-201ENST00000342725 CENPBP07199 599 aaPredicted RBP29.25■■■□□ 2.27
EBF4-201ENST00000342725 RAPGEF2Q9Y4G8 1499 aa29.25■■■□□ 2.27
EBF4-201ENST00000342725 ZNF316A6NFI3 1004 aaPredicted RBP29.24■■■□□ 2.27
EBF4-201ENST00000342725 HNRNPUL2Q1KMD3 747 aaKnown RBP29.18■■■□□ 2.26
EBF4-201ENST00000342725 TOP2BQ02880 1626 aa29.18■■■□□ 2.26
EBF4-201ENST00000342725 APLP2Q06481 763 aa29.11■■■□□ 2.25
EBF4-201ENST00000342725 GTF3C3Q9Y5Q9 886 aa29.08■■■□□ 2.25
EBF4-201ENST00000342725 BIVM-ERCC5R4GMW8 1640 aa29.08■■■□□ 2.25
EBF4-201ENST00000342725 FANCD2Q9BXW9 1451 aa29.03■■■□□ 2.24
EBF4-201ENST00000342725 CUX1P39880 1505 aa29.01■■■□□ 2.24
EBF4-201ENST00000342725 RANGAP1P46060 587 aaPredicted RBP29■■■□□ 2.23
EBF4-201ENST00000342725 ERICH3Q5RHP9 1530 aa28.99■■■□□ 2.23
EBF4-201ENST00000342725 PRXQ9BXM0 1461 aa28.95■■■□□ 2.23
EBF4-201ENST00000342725 ARAP1Q96P48 1450 aa28.88■■■□□ 2.21
EBF4-201ENST00000342725 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
EBF4-201ENST00000342725 LAMC3Q9Y6N6 1575 aa28.83■■■□□ 2.21
EBF4-201ENST00000342725 MIER1Q8N108 512 aa28.83■■■□□ 2.21
EBF4-201ENST00000342725 YTHDC1Q96MU7 727 aaKnown RBP28.79■■■□□ 2.2
EBF4-201ENST00000342725 PDS5BQ9NTI5 1447 aa28.77■■■□□ 2.2
EBF4-201ENST00000342725 KIF27Q86VH2 1401 aa28.75■■■□□ 2.19
EBF4-201ENST00000342725 CLSPNQ9HAW4 1339 aa28.75■■■□□ 2.19
EBF4-201ENST00000342725 FGD5Q6ZNL6 1462 aa28.74■■■□□ 2.19
EBF4-201ENST00000342725 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
EBF4-201ENST00000342725 DHX57Q6P158 1386 aaKnown RBP28.71■■■□□ 2.19
EBF4-201ENST00000342725 KANK4Q5T7N3 995 aaPredicted RBP28.71■■■□□ 2.19
EBF4-201ENST00000342725 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.18
EBF4-201ENST00000342725 URB2Q14146 1524 aaKnown RBP28.68■■■□□ 2.18
EBF4-201ENST00000342725 TOPBP1Q92547 1522 aa28.67■■■□□ 2.18
EBF4-201ENST00000342725 RRBP1Q9P2E9 1410 aaKnown RBP28.65■■■□□ 2.18
EBF4-201ENST00000342725 CUX2O14529 1486 aa28.62■■■□□ 2.17
EBF4-201ENST00000342725 ARHGAP35Q9NRY4 1499 aa28.58■■■□□ 2.17
EBF4-201ENST00000342725 POLA1P09884 1462 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms