RNA–Protein interactions for RNA: ENST00000473444.1

MKRN1-207, Transcript of makorin ring finger protein 1, humanhuman

TSL 3

Gene MKRN1, Length 720 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-207ENST00000473444 NISCHQ9Y2I1 1504 aa45.59■■■■■ 4.89
MKRN1-207ENST00000473444 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
MKRN1-207ENST00000473444 ABCC9O60706 1549 aa40.35■■■■■ 4.05
MKRN1-207ENST00000473444 RB1CC1Q8TDY2 1594 aa38.64■■■■□ 3.78
MKRN1-207ENST00000473444 NACADO15069 1562 aa38.48■■■■□ 3.75
MKRN1-207ENST00000473444 DCAF8L2P0C7V8 631 aa38.36■■■■□ 3.73
MKRN1-207ENST00000473444 MYO15BQ96JP2 1530 aa38.09■■■■□ 3.69
MKRN1-207ENST00000473444 ZCCHC6Q5VYS8 1495 aaKnown RBP37.84■■■■□ 3.65
MKRN1-207ENST00000473444 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
MKRN1-207ENST00000473444 PABPN1Q86U42 306 aaKnown RBP eCLIP37.64■■■■□ 3.62
MKRN1-207ENST00000473444 UNC13AQ9UPW8 1703 aa37.64■■■■□ 3.62
MKRN1-207ENST00000473444 DNAJC5BQ9UF47 199 aa37.49■■■■□ 3.59
MKRN1-207ENST00000473444 BICRAQ9NZM4 1560 aa37.41■■■■□ 3.58
MKRN1-207ENST00000473444 SCRIBQ14160 1630 aa37.1■■■■□ 3.53
MKRN1-207ENST00000473444 SHROOM4Q9ULL8 1493 aa37.08■■■■□ 3.53
MKRN1-207ENST00000473444 EIF4G1Q04637 1599 aaKnown RBP36.49■■■■□ 3.43
MKRN1-207ENST00000473444 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
MKRN1-207ENST00000473444 CECR2Q9BXF3 1484 aa36.35■■■■□ 3.41
MKRN1-207ENST00000473444 NCAPD3P42695 1498 aa35.51■■■■□ 3.28
MKRN1-207ENST00000473444 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
MKRN1-207ENST00000473444 ATAD2BQ9ULI0 1458 aa35.42■■■■□ 3.26
MKRN1-207ENST00000473444 BAZ1AQ9NRL2 1556 aaPredicted RBP35.39■■■■□ 3.26
MKRN1-207ENST00000473444 SMARCA2P51531 1590 aa35.38■■■■□ 3.25
MKRN1-207ENST00000473444 HMGXB3Q12766 1538 aa35.26■■■■□ 3.23
MKRN1-207ENST00000473444 PEG3Q9GZU2 1588 aa35.14■■■■□ 3.22
MKRN1-207ENST00000473444 BAZ1BQ9UIG0 1483 aaKnown RBP35.11■■■■□ 3.21
MKRN1-207ENST00000473444 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
MKRN1-207ENST00000473444 ERCC6Q03468 1493 aa34.88■■■■□ 3.17
MKRN1-207ENST00000473444 NESP48681 1621 aa34.74■■■■□ 3.15
MKRN1-207ENST00000473444 CUX2O14529 1486 aa34.7■■■■□ 3.15
MKRN1-207ENST00000473444 WIZO95785 1651 aa34.67■■■■□ 3.14
MKRN1-207ENST00000473444 LAMC3Q9Y6N6 1575 aa34.64■■■■□ 3.14
MKRN1-207ENST00000473444 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
MKRN1-207ENST00000473444 PDS5BQ9NTI5 1447 aa34.47■■■■□ 3.11
MKRN1-207ENST00000473444 CADPSQ9ULU8 1353 aa34.46■■■■□ 3.11
MKRN1-207ENST00000473444 THOC2Q8NI27 1593 aaKnown RBP34.32■■■■□ 3.09
MKRN1-207ENST00000473444 TOP2AP11388 1531 aaKnown RBP34.32■■■■□ 3.08
MKRN1-207ENST00000473444 KIF21AQ7Z4S6 1674 aa34.29■■■■□ 3.08
MKRN1-207ENST00000473444 DNAJC5Q9H3Z4 198 aa34.24■■■■□ 3.07
MKRN1-207ENST00000473444 CFTRP13569 1480 aa34.12■■■■□ 3.05
MKRN1-207ENST00000473444 MRC2Q9UBG0 1479 aa34.1■■■■□ 3.05
MKRN1-207ENST00000473444 CEP164Q9UPV0 1460 aa34.05■■■■□ 3.04
MKRN1-207ENST00000473444 FANCD2Q9BXW9 1451 aa34.03■■■■□ 3.04
MKRN1-207ENST00000473444 WDR62O43379 1518 aa33.99■■■■□ 3.03
MKRN1-207ENST00000473444 CCDC88BA6NC98 1476 aa33.92■■■■□ 3.02
MKRN1-207ENST00000473444 PRDM2Q13029 1718 aa33.76■■■■□ 3
MKRN1-207ENST00000473444 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
MKRN1-207ENST00000473444 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
MKRN1-207ENST00000473444 TOPBP1Q92547 1522 aa33.42■■■□□ 2.94
MKRN1-207ENST00000473444 IFT140Q96RY7 1462 aa33.37■■■□□ 2.93
MKRN1-207ENST00000473444 DNMBPQ6XZF7 1577 aa33.34■■■□□ 2.93
MKRN1-207ENST00000473444 SUPT5HO00267 1087 aaKnown RBP33.31■■■□□ 2.92
MKRN1-207ENST00000473444 OSCARQ8IYS5 282 aa33.21■■■□□ 2.91
MKRN1-207ENST00000473444 ZNF608Q9ULD9 1512 aaPredicted RBP33.2■■■□□ 2.91
MKRN1-207ENST00000473444 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
MKRN1-207ENST00000473444 TARBP1Q13395 1621 aaKnown RBP33.06■■■□□ 2.88
MKRN1-207ENST00000473444 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
MKRN1-207ENST00000473444 SOGA1O94964 1423 aa33.01■■■□□ 2.87
MKRN1-207ENST00000473444 AQRO60306 1485 aaKnown RBP eCLIP32.99■■■□□ 2.87
MKRN1-207ENST00000473444 RAD54L2Q9Y4B4 1467 aa32.95■■■□□ 2.87
MKRN1-207ENST00000473444 CUX1P39880 1505 aa32.95■■■□□ 2.87
MKRN1-207ENST00000473444 FGD5Q6ZNL6 1462 aa32.94■■■□□ 2.86
MKRN1-207ENST00000473444 TRIM41Q8WV44 630 aa32.87■■■□□ 2.85
MKRN1-207ENST00000473444 TDRD9Q8NDG6 1382 aaKnown RBP32.85■■■□□ 2.85
MKRN1-207ENST00000473444 WDR97A6NE52 1622 aa32.84■■■□□ 2.85
MKRN1-207ENST00000473444 FBLN2P98095 1184 aa32.75■■■□□ 2.83
MKRN1-207ENST00000473444 CHD1O14646 1710 aa32.71■■■□□ 2.83
MKRN1-207ENST00000473444 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
MKRN1-207ENST00000473444 SNAPC4Q5SXM2 1469 aa32.66■■■□□ 2.82
MKRN1-207ENST00000473444 MAGI1Q96QZ7 1491 aaPredicted RBP32.64■■■□□ 2.82
MKRN1-207ENST00000473444 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
MKRN1-207ENST00000473444 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
MKRN1-207ENST00000473444 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
MKRN1-207ENST00000473444 ABCA10Q8WWZ4 1543 aa32.62■■■□□ 2.81
MKRN1-207ENST00000473444 WRNQ14191 1432 aaPredicted RBP eCLIP32.6■■■□□ 2.81
MKRN1-207ENST00000473444 CHMP7Q8WUX9 453 aaPredicted RBP32.6■■■□□ 2.81
MKRN1-207ENST00000473444 ARHGEF11O15085 1522 aa32.59■■■□□ 2.81
MKRN1-207ENST00000473444 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
MKRN1-207ENST00000473444 TOP2BQ02880 1626 aa32.56■■■□□ 2.8
MKRN1-207ENST00000473444 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
MKRN1-207ENST00000473444 SYNJ2O15056 1496 aa32.51■■■□□ 2.79
MKRN1-207ENST00000473444 ABCA5Q8WWZ7 1642 aa32.5■■■□□ 2.79
MKRN1-207ENST00000473444 PBRM1Q86U86 1689 aa32.5■■■□□ 2.79
MKRN1-207ENST00000473444 SYNJ1O43426 1573 aa32.48■■■□□ 2.79
MKRN1-207ENST00000473444 CLASP1Q7Z460 1538 aa32.37■■■□□ 2.77
MKRN1-207ENST00000473444 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
MKRN1-207ENST00000473444 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
MKRN1-207ENST00000473444 ERICH3Q5RHP9 1530 aa32.23■■■□□ 2.75
MKRN1-207ENST00000473444 GRIN2AQ12879 1464 aa32.23■■■□□ 2.75
MKRN1-207ENST00000473444 ADAMTS12P58397 1594 aa32.22■■■□□ 2.75
MKRN1-207ENST00000473444 FHAD1B1AJZ9 1412 aa32.21■■■□□ 2.75
MKRN1-207ENST00000473444 NUP160Q12769 1436 aa32.09■■■□□ 2.73
MKRN1-207ENST00000473444 CEP170Q5SW79 1584 aa32.05■■■□□ 2.72
MKRN1-207ENST00000473444 KIF27Q86VH2 1401 aa31.99■■■□□ 2.71
MKRN1-207ENST00000473444 TRHP20396 242 aaPredicted RBP31.91■■■□□ 2.7
MKRN1-207ENST00000473444 IGF1RP08069 1367 aa31.9■■■□□ 2.7
MKRN1-207ENST00000473444 SHROOM2Q13796 1616 aa31.89■■■□□ 2.7
MKRN1-207ENST00000473444 ERCC6L2Q5T890 1561 aa31.85■■■□□ 2.69
MKRN1-207ENST00000473444 CUL7Q14999 1698 aa31.83■■■□□ 2.69
MKRN1-207ENST00000473444 JPH4Q96JJ6 628 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms