Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCDH11YQ9BZA8 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PCDH11YQ9BZA8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.55■■■□□ 2.64
PCDH11YQ9BZA8 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDH11YQ9BZA8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDH11YQ9BZA8 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.54■■■□□ 2.64
PCDH11YQ9BZA8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCDH11YQ9BZA8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCDH11YQ9BZA8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCDH11YQ9BZA8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PCDH11YQ9BZA8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC31.53■■■□□ 2.64
PCDH11YQ9BZA8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 MIR4281-201ENST00000580852 62 ntBASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCDH11YQ9BZA8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.51■■■□□ 2.64
PCDH11YQ9BZA8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.51■■■□□ 2.64
PCDH11YQ9BZA8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.5■■■□□ 2.63
PCDH11YQ9BZA8 AC092028.1-203ENST00000608262 953 ntBASIC31.5■■■□□ 2.63
PCDH11YQ9BZA8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
PCDH11YQ9BZA8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PCDH11YQ9BZA8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PCDH11YQ9BZA8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
PCDH11YQ9BZA8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.49■■■□□ 2.63
PCDH11YQ9BZA8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.49■■■□□ 2.63
PCDH11YQ9BZA8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PCDH11YQ9BZA8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.49■■■□□ 2.63
PCDH11YQ9BZA8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PCDH11YQ9BZA8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
PCDH11YQ9BZA8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
PCDH11YQ9BZA8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PCDH11YQ9BZA8 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.47■■■□□ 2.63
PCDH11YQ9BZA8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
PCDH11YQ9BZA8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDH11YQ9BZA8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDH11YQ9BZA8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
PCDH11YQ9BZA8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.45■■■□□ 2.62
PCDH11YQ9BZA8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 AP004609.3-201ENST00000610705 1884 ntBASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 AC131281.2-201ENST00000520478 145 ntBASIC31.44■■■□□ 2.62
PCDH11YQ9BZA8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
PCDH11YQ9BZA8 MIR935-201ENST00000401179 91 ntBASIC31.43■■■□□ 2.62
PCDH11YQ9BZA8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.43■■■□□ 2.62
PCDH11YQ9BZA8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.43■■■□□ 2.62
PCDH11YQ9BZA8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCDH11YQ9BZA8 MIR638-201ENST00000385237 100 ntBASIC31.42■■■□□ 2.62
PCDH11YQ9BZA8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDH11YQ9BZA8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCDH11YQ9BZA8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.41■■■□□ 2.62
PCDH11YQ9BZA8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDH11YQ9BZA8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDH11YQ9BZA8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDH11YQ9BZA8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
PCDH11YQ9BZA8 AC011551.1-201ENST00000614101 683 ntBASIC31.4■■■□□ 2.62
PCDH11YQ9BZA8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.39■■■□□ 2.62
PCDH11YQ9BZA8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC31.38■■■□□ 2.61
PCDH11YQ9BZA8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCDH11YQ9BZA8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.38■■■□□ 2.61
PCDH11YQ9BZA8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
PCDH11YQ9BZA8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCDH11YQ9BZA8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.38■■■□□ 2.61
PCDH11YQ9BZA8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.37■■■□□ 2.61
PCDH11YQ9BZA8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.37■■■□□ 2.61
PCDH11YQ9BZA8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDH11YQ9BZA8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
PCDH11YQ9BZA8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 AL117332.1-201ENST00000622628 974 ntBASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
PCDH11YQ9BZA8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PCDH11YQ9BZA8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PCDH11YQ9BZA8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PCDH11YQ9BZA8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDH11YQ9BZA8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.34■■■□□ 2.61
PCDH11YQ9BZA8 AL139246.5-201ENST00000606645 996 ntBASIC31.34■■■□□ 2.61
PCDH11YQ9BZA8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.34■■■□□ 2.61
PCDH11YQ9BZA8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms